Gene Smed_3371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3371 
Symbol 
ID5324255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3573660 
End bp3574478 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content67% 
IMG OID640792322 
Productdihydrodipicolinate reductase 
Protein accessionYP_001329027 
Protein GI150398560 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA CGGACATGAG GCTCGTGGTG GTCGGTGCGG CCGGCCGTAT GGGCCAGACG 
CTGATCCGGA TCGTTCACGA GACGCCCGGC GTGCGCCTTC ATGCCGCCAT CGAACGGAGT
GGATCGCCCT TCCTCGGACG CGATGCCGGA GAGCTGGCCG GCGTCGGCCA GATGGGGGTC
GCCGTTTCCG ACAAGCCGCT CGAAGCCTTC GTCGAGGCCG AGGGTGTGCT CGATTTCACG
GCGCCCTCGG CCACGGTGGA ATTCGCGGAC CTTGCCGCGC AGGCGCGCAT CGTCCATGTC
GTCGGCACGA CCGGCTGCTC GGCGGATGAC GAGGCGAGGA TCCGTGCCGC CGCCCGTCAC
GCCCGCGTCA TCAAGTCAGG CAATATGAGC CTCGGCGTCA ACCTGCTTGG CGTGCTCACG
GAAAAGGCAG CGCGTGCGCT TCCGGCTCAG GGGTGGGACA TAGAAATCCT CGAAATGCAC
CACAGGCACA AGGTCGATGC CCCTTCCGGC ACGGCGCTGC TTCTCGGCGA GGCGGCAGCC
AGAGGTCGCG GCATCAAACT TGCGGATCAC TCCGTGCGGG TACGCGACGG TCACACCGGA
GCGCGGGTCG AAGGGGCAAT AGGCTTTGCC ACATTGCGCG GCGGCTCCGT GATCGGCGAG
CACTCGGTGG TGATCGCCGG AGAAGGCGAA ATGGTCACGC TTTCCCACAG CGCGACCGAC
CGCTCGATCT TCGCTCGCGG CGCCGTATCT GCGGCGATCT GGGGGCGGAG CCAGAAGCCG
GGCTTTTACT CCATGCTCGA CGTTCTCGGG CTTGACTGA
 
Protein sequence
MSETDMRLVV VGAAGRMGQT LIRIVHETPG VRLHAAIERS GSPFLGRDAG ELAGVGQMGV 
AVSDKPLEAF VEAEGVLDFT APSATVEFAD LAAQARIVHV VGTTGCSADD EARIRAAARH
ARVIKSGNMS LGVNLLGVLT EKAARALPAQ GWDIEILEMH HRHKVDAPSG TALLLGEAAA
RGRGIKLADH SVRVRDGHTG ARVEGAIGFA TLRGGSVIGE HSVVIAGEGE MVTLSHSATD
RSIFARGAVS AAIWGRSQKP GFYSMLDVLG LD