Gene Smed_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3369 
Symbolglk 
ID5324253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3570692 
End bp3571711 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content65% 
IMG OID640792320 
Productglucokinase 
Protein accessionYP_001329025 
Protein GI150398558 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0837] Glucokinase 
TIGRFAM ID[TIGR00749] glucokinase, proteobacterial type 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATG CGAGTGACCA AAGCTTCCCC TTTCCGATTT TGATCGGCGA CATCGGCGGC 
ACCAATGCCC GCTTCGCATT GCTTACCGAC GCCTATGGCG AGCCGAGGCA GCTTGAGCCG
ATCAGGACGG GCGATTTCGC CACCATCGAA GAGGCAATGC AGAAAAGCAT CCTCGACAAG
ACTTCCGTCC AGCCGCGCTC GGCGATTCTT GCCGTAGCGG GGCCGATCAA GGGCGACGAG
ATACCGCTGA CGAATGCCCA TTGGGTGATT CGCCCGAAGG ATATGCTGGC GAGCCTCGGC
CTCGAAGACG TGCTGATCAT CAATGATTTC GAGGCGCAGG CGCTCGCCAT TGCCGCCCCG
GCCGACCAGG ACGTCGTGCA GATCGGCGGC GGCGCGGTCC GGCCCTTCAA TTCGCGCGTC
GTCCTTGGTC CGGGTACCGG TCTGGGGGTC GCGGGCCTCG TCTATGCGCA GCACAGCTGG
ATACCCGTCC CCGGAGAAGG CGGGCATGTC GATTTAGGTC CGCGCACCGA GCGCGACTTT
GAGATATGGC CGTTTCTGGA GCCGATCGAG GGGCGCATGG CCGGCGAGCA GATACTGTGC
GGCCGCGGCA TCATGAATCT CTATCGCGCG GTCTGCGCCG CCAATGGCGA AGCGGCGGTT
CTCGCGGATC AGGCGGCGGT GACGACGAGT GCGTTGTCCG GTGCGGATGC CGCGGCGGTC
GAAACCGTGT CGCTCTTTGC GACTTATCTC GGGCGCGTTG CCGGCGATAT GGCGCTTATC
TTCATGGCGC GGGGCGGGGT ATTCCTTGCC GGCGGCATTT CGCAGAAGAT CCTGCCGGCG
CTGATGAAGC CTGAGTTCCG CGCCGCCTTC GAGGACAAGG CGCCACATTC GGCGCTGATG
CGGACGATCC CGACCTTTGC CGTCATCCAC CCGATGGCCG CGCTCTCCGG CCTCGCAGCC
TTTGCCCGCA CGCCGAGGGA CTTCGGTGTT GCAATGGAGG GACGCCGCTG GAGAAGGTGA
 
Protein sequence
MPNASDQSFP FPILIGDIGG TNARFALLTD AYGEPRQLEP IRTGDFATIE EAMQKSILDK 
TSVQPRSAIL AVAGPIKGDE IPLTNAHWVI RPKDMLASLG LEDVLIINDF EAQALAIAAP
ADQDVVQIGG GAVRPFNSRV VLGPGTGLGV AGLVYAQHSW IPVPGEGGHV DLGPRTERDF
EIWPFLEPIE GRMAGEQILC GRGIMNLYRA VCAANGEAAV LADQAAVTTS ALSGADAAAV
ETVSLFATYL GRVAGDMALI FMARGGVFLA GGISQKILPA LMKPEFRAAF EDKAPHSALM
RTIPTFAVIH PMAALSGLAA FARTPRDFGV AMEGRRWRR