Gene Smed_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3360 
Symbol 
ID5324244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3560268 
End bp3560612 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content60% 
IMG OID640792311 
ProductMarR family transcriptional regulator 
Protein accessionYP_001329016 
Protein GI150398549 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.592364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCGGTCG AACTTACCCC TTCTCAGGCG CTGGGGCTCT GGCATACGGT GTCACTCGAA 
CAGGTGCGCA TCGACAGCCG CGATCTGACC TTGCGTCAGA TGGCGATCCT GTTACAGATT
TACCTGGTAC CGCCGCCCCA CACGGTGCGC GGCCTCGCCG CCGCCCTCGA TGTGACGAAG
CCGGTGATCA CACGTGCGCT CGACACCATG GGCGCGCTTG GCCTCGTCGA TCGCTCCCGC
GACGAGCGCG ACAGGCGCAA TGTCATCATC AAGCGCACTT TGGAAGGTGC TCTCTATCTT
GAAAAATTCG GCGATCTGAT CATCAATCAA GGCCGGAAAC TATGA
 
Protein sequence
MPVELTPSQA LGLWHTVSLE QVRIDSRDLT LRQMAILLQI YLVPPPHTVR GLAAALDVTK 
PVITRALDTM GALGLVDRSR DERDRRNVII KRTLEGALYL EKFGDLIINQ GRKL