Gene Smed_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3359 
Symbol 
ID5324243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3558798 
End bp3560195 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content64% 
IMG OID640792310 
Productleucyl aminopeptidase 
Protein accessionYP_001329015 
Protein GI150398548 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0260] Leucyl aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.452222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCCCT ACCAGTTCAT CGAGCGGCCA TCGCCGTTCA ACACAAGCAA CGGCAAGACG 
CTGCCGATCT TTGCGGTGAC GCCGTCGCAT ATCGAGACGG GGAGCATCGA CCCTATAGCG
CTCGACTGGG CGAAGAAGGC CGGCTTCAAG GCGGAATCGG GCGCGGTGCT GCTTATCCCC
TCGGCCGACG GCCAACTCGG CGGCGCGCTG TTCGGTCTGG GCGCCAACCC TTCCGAGGCA
CCATTCCTGA CCGGCAAGCT CGCCCGGACG CTCCCTGCCG GCAAATGGCA TGTCGAAACG
GCGCCTCTCA CGGCCAACCG GCTGGCGCTC GGCTACGGCC TCGGCTCCTA TCGTTTCGAG
CGCTACAAAT CTGCAAAAGC CGAAGCGCCG ACGCTGCTCG TTCCGGCCGA TGCCGACGCG
GCGGATATCA AGCGCCAGCT CGCTGGCGTC TTCCTCGCCC GCGACCTCAT CAACACACCC
ACCAACGACA TGGGGCCGGA AGCGTTGGAG GCCGCCTTCC GGGCACTGGC TGCCCATTAC
AAGGCCGAGG TTTCGGTGGT CTCGGGCGAA GCGCTGCTCG CGGAGAATTT TCCGCTCGTT
CATACGGTCG GCCGCGCCAG TGCCGAAGCG CCGCGGCTTC TTGAAATGCG CTGGGGCAGG
AAAGGGCACA AGAGGGTGAC GCTCGTCGGC AAGGGCGTCT GCTTCGACAC CGGCGGACTG
GACATCAAGC CGGCCGCATC GATGCTGCTC ATGAAGAAGG ATATGGGCGG TGCTGCAAAC
GTCATGGGCC TCGCTCTGAT GATCATGGAT GCCAAACTCA AGGTGGATCT GCGCGTCCTC
ATCCCGGTGG TCGAGAACTC GATCTCGGCA AACGCCTTCC GCCCGGGCGA CATCTACAAG
AGCCGGAAGG GCCTGACCGT GCAGATCGAC AACACGGACG CAGAGGGCCG ACTGATCCTC
GCCGATGCGC TCGCTTACGC GGACGAGGAG AAGACAGACC TCATTATCGA CATGGCGACG
CTGACCGGCG CCGCCCGAGT CGCGCTCGGT CCGGACCTGC CGCCCTTCTT CACCGACGAC
GAAGATCTCG CCCGCGATCT GGCTGAGGCG AGCCTTACCG TGGACGATCC GCTCTGGCGG
ATGCCGCTCT ACAAGGGCTA CGACAAAGAT GTTTCCGCCC GCATCGCCGA TCTGACCAAC
GCGCCTTCCG GCGGTATGGC CGGTTCGATC ACAGCGGCGC TTTTCCTCAG ACGCTTCGTA
ACGAATGCGA AAAGCTGGGT TCACTTCGAC ATTTTCGGCT GGGCACAAGC CGAGCGTCCG
CATTCGCCGG TCGGCGGCGA GGCGCAGGCG ATCCGGGCGC TTTATCATCA TATCGGGAGG
GGCGCGGCCC GCATTTGA
 
Protein sequence
MAPYQFIERP SPFNTSNGKT LPIFAVTPSH IETGSIDPIA LDWAKKAGFK AESGAVLLIP 
SADGQLGGAL FGLGANPSEA PFLTGKLART LPAGKWHVET APLTANRLAL GYGLGSYRFE
RYKSAKAEAP TLLVPADADA ADIKRQLAGV FLARDLINTP TNDMGPEALE AAFRALAAHY
KAEVSVVSGE ALLAENFPLV HTVGRASAEA PRLLEMRWGR KGHKRVTLVG KGVCFDTGGL
DIKPAASMLL MKKDMGGAAN VMGLALMIMD AKLKVDLRVL IPVVENSISA NAFRPGDIYK
SRKGLTVQID NTDAEGRLIL ADALAYADEE KTDLIIDMAT LTGAARVALG PDLPPFFTDD
EDLARDLAEA SLTVDDPLWR MPLYKGYDKD VSARIADLTN APSGGMAGSI TAALFLRRFV
TNAKSWVHFD IFGWAQAERP HSPVGGEAQA IRALYHHIGR GAARI