| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3350 |
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| Symbol | |
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| ID | 5324234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3548902 |
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| End bp | 3549414 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640792301 |
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| Product | peptidase A24A prepilin type IV |
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| Protein accession | YP_001329006 |
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| Protein GI | 150398539 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4960] Flp pilus assembly protein, protease CpaA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTATCG CAGCGATCTT TGTAGTTTTC CCATTTTGCC TGGCATTTGC AGCGTTCTCG
GACCTGTTCA CAATGACAAT TCCGAACCGC ATATCGGCAA TCGTGCTTGT TTCTTTCGTC
GTTATCTCAC CTTTAGCCGG CCTCGACGCA TCCAAGGCAT GCTTGCATGT GGCAGCTGCT
GTGCTGGTAT TTGGAGCTTG CTTCTGCCTT TTCGCAGTGA ATGTCATGGG AGGCGGTGAC
GCAAAACTCC TTACGGCAAG TGCGATTTGG TTCGGTTTCG AGGCGTCCCT GATTGATTTT
CTCTTGTATG TCTCCGCCTT CGGCGGTCTG TTGACGATCG CCGTTCTTCT CCTGCGCAGC
CAGGAAAACC TGATCCTTGC CGCGCGCATC CCGGTTCCGC GCTTGCTGCT GACGGCGAAG
AAAATCCCAT ACGGCATCGC CATAGCGCTG GGCGGGTTCG CCGCCTATCC TTCTTCGCCG
CTGATGAAGC TGGCCCTCAC ACAGTTCTCC TGA
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| Protein sequence | MTIAAIFVVF PFCLAFAAFS DLFTMTIPNR ISAIVLVSFV VISPLAGLDA SKACLHVAAA
VLVFGACFCL FAVNVMGGGD AKLLTASAIW FGFEASLIDF LLYVSAFGGL LTIAVLLLRS
QENLILAARI PVPRLLLTAK KIPYGIAIAL GGFAAYPSSP LMKLALTQFS
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