Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3341 |
Symbol | |
ID | 5324225 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3541280 |
End bp | 3542077 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792292 |
Product | purine nucleoside phosphorylase |
Protein accession | YP_001328997 |
Protein GI | 150398530 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0005] Purine nucleoside phosphorylase |
TIGRFAM ID | [TIGR01697] inosine guanosine and xanthosine phosphorylase family [TIGR01698] purine nucleotide phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.623728 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGG CGGCAGAGTT CCTCAAGGGT AAACTCGGAG CGCTTGCGCC CCGCTACGCA ATCGTGCTCG GTTCCGGTCT CGGTGCGCTC GTCGACGCAG TGGCCGACCC GCTGCGTATT CCCTATGCGG AGATACCGGG CTTCCCGGTG AGTGGCGTTT CCGGCCATGC CGGCACGTTC GTCGCGGGCA GGATCGGCGG TACTCCGGTC GCTGTGCTTT CCGGCCGGGC GCACTATTAC GAGCGCGGCG ACGCAAACGC CATGCGCGTG CCGATAGAGA CGCTGAAGCG GATCGGCGTC GACAACTTGA TCCTTACCAA TTCGGCCGGG TCGCTGCGCG AAGACATGCC GCCGGGCTCC GTGATGCGGA TCGCCGATCA CATCGCCTTT GCCGGTGCCA ATCCGCTGAT CGGCGTGGAG AGCGACGCGC GTTTCGTGGG CATGACCAAT GCATACGACG CGGCGCTGGC TGTCGGGATG GAGGAGACCG CCGAGCGCCT CGGCATTCCG CTCGCGCGCG GCGTCTATAT GTGGTTCTCC GGGCCAAGCT TCGAAACGCC GGCCGAAATC CGCATGGCAC GTATTTTAGG CGCCGATGCT GTCGGCATGT CCACGGTGCC GGAGGTCATT CTCGCCCGGT TTTTCGGCAT CAGGGTTGCC GCCGCCTCCG TCATCACCAA TTTCGCTGCC GGAATGACCG GGGCCGAGCT CAGCCATGAA GAAACCAAGG AAATGGCGCC GCTTGGCGGC ACGCGCCTGG CGGCCATCCT GAAGGAAATG GTCGCGAGCG AAGGCTGA
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Protein sequence | MTAAAEFLKG KLGALAPRYA IVLGSGLGAL VDAVADPLRI PYAEIPGFPV SGVSGHAGTF VAGRIGGTPV AVLSGRAHYY ERGDANAMRV PIETLKRIGV DNLILTNSAG SLREDMPPGS VMRIADHIAF AGANPLIGVE SDARFVGMTN AYDAALAVGM EETAERLGIP LARGVYMWFS GPSFETPAEI RMARILGADA VGMSTVPEVI LARFFGIRVA AASVITNFAA GMTGAELSHE ETKEMAPLGG TRLAAILKEM VASEG
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