Gene Smed_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3341 
Symbol 
ID5324225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3541280 
End bp3542077 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID640792292 
Productpurine nucleoside phosphorylase 
Protein accessionYP_001328997 
Protein GI150398530 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0005] Purine nucleoside phosphorylase 
TIGRFAM ID[TIGR01697] inosine guanosine and xanthosine phosphorylase family
[TIGR01698] purine nucleotide phosphorylase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.623728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGG CGGCAGAGTT CCTCAAGGGT AAACTCGGAG CGCTTGCGCC CCGCTACGCA 
ATCGTGCTCG GTTCCGGTCT CGGTGCGCTC GTCGACGCAG TGGCCGACCC GCTGCGTATT
CCCTATGCGG AGATACCGGG CTTCCCGGTG AGTGGCGTTT CCGGCCATGC CGGCACGTTC
GTCGCGGGCA GGATCGGCGG TACTCCGGTC GCTGTGCTTT CCGGCCGGGC GCACTATTAC
GAGCGCGGCG ACGCAAACGC CATGCGCGTG CCGATAGAGA CGCTGAAGCG GATCGGCGTC
GACAACTTGA TCCTTACCAA TTCGGCCGGG TCGCTGCGCG AAGACATGCC GCCGGGCTCC
GTGATGCGGA TCGCCGATCA CATCGCCTTT GCCGGTGCCA ATCCGCTGAT CGGCGTGGAG
AGCGACGCGC GTTTCGTGGG CATGACCAAT GCATACGACG CGGCGCTGGC TGTCGGGATG
GAGGAGACCG CCGAGCGCCT CGGCATTCCG CTCGCGCGCG GCGTCTATAT GTGGTTCTCC
GGGCCAAGCT TCGAAACGCC GGCCGAAATC CGCATGGCAC GTATTTTAGG CGCCGATGCT
GTCGGCATGT CCACGGTGCC GGAGGTCATT CTCGCCCGGT TTTTCGGCAT CAGGGTTGCC
GCCGCCTCCG TCATCACCAA TTTCGCTGCC GGAATGACCG GGGCCGAGCT CAGCCATGAA
GAAACCAAGG AAATGGCGCC GCTTGGCGGC ACGCGCCTGG CGGCCATCCT GAAGGAAATG
GTCGCGAGCG AAGGCTGA
 
Protein sequence
MTAAAEFLKG KLGALAPRYA IVLGSGLGAL VDAVADPLRI PYAEIPGFPV SGVSGHAGTF 
VAGRIGGTPV AVLSGRAHYY ERGDANAMRV PIETLKRIGV DNLILTNSAG SLREDMPPGS
VMRIADHIAF AGANPLIGVE SDARFVGMTN AYDAALAVGM EETAERLGIP LARGVYMWFS
GPSFETPAEI RMARILGADA VGMSTVPEVI LARFFGIRVA AASVITNFAA GMTGAELSHE
ETKEMAPLGG TRLAAILKEM VASEG