| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3339 |
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| Symbol | |
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| ID | 5324223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3539850 |
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| End bp | 3540821 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640792290 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001328995 |
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| Protein GI | 150398528 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1079] Uncharacterized ABC-type transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.460732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTTC TTCACGTTCT CTTCGTGCTC CTGGAATCGA CGATCCGCGT CTCCGTGCCT
CTGGTGTTCG CGGCGCTTGC CGGCCTCTTC ACCGAGCGCG CCGGCGTCTT CGACATCGGG
CTGGAAGGCA AGATGCTTGG TGCGGCCTTT GCCGCCGGTG CGGCGGCGGC AGTCACGCAA
TCGGTTTGGG TCGGGCTCGT TGCGGCCGTC CTCGTTTCGG TGGCTCTGTC GCTGGTCCAT
GGCTATGCTT CGATCACCCA GCGCGGCAAC CAGATCGTTT CCGGCGTCGC GATCAACTTC
ATCGTCGCCG GGTCCACCGT TATCCTGGGC GAAGCCTGGT TCCGGCAGGG CGGCCGGACG
CCGGCCCTTG CCGAAGGGGC GCGATTCCAG ACGATCAATT TTCCGGGTGC CGACGCGGTC
CGCGAAATTC CGGTCCTCGG ACCTGTCTAT GCGGACCTCC TGTCCGGCCA TTTCCTGCTC
ACCTATCTGG CCTTCGCAAT GGTGCCGTTC AGCTGGTGGA TTCTCTATCG CACCCGTTTC
GGCCTGAGAC TGCGTGCCGT CGGCGAGAAT CCGGGCGCCG TCGACACCGC CGGAATCTCG
GTGATCTGGC TCAGATATCG CGCTGTCATC TGCTGCGGCA TTCTCTGCGG CTTTGCCGGC
GCCTATCTCT CGCTTGCGAT GACGGCGGGC TTCGTCAAGG GCATGACGGC GGGCAAGGGC
TATATCGCGC TCGCGGCGCT CATCTTCGCA AAATGGCGCC CGCTCAACAT AATGTTCGCC
TGCCTGCTCT TCGGCTTCCT CGACGCGCTC GCCATCCGTC TGCAAGGCAC GCCCCTGCCG
CTTATCGGCC AGGTTCCGGT ACAGCTCATG CAGGCACTGC CCTATATCCT CACCGTCGTT
CTGCTTGCCG GATTTATCGG CAAGGCCATT CCGCCCAAGG CGGGCGGCGT ACCCTATGTG
AAGGAGCGCT AA
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| Protein sequence | MDFLHVLFVL LESTIRVSVP LVFAALAGLF TERAGVFDIG LEGKMLGAAF AAGAAAAVTQ
SVWVGLVAAV LVSVALSLVH GYASITQRGN QIVSGVAINF IVAGSTVILG EAWFRQGGRT
PALAEGARFQ TINFPGADAV REIPVLGPVY ADLLSGHFLL TYLAFAMVPF SWWILYRTRF
GLRLRAVGEN PGAVDTAGIS VIWLRYRAVI CCGILCGFAG AYLSLAMTAG FVKGMTAGKG
YIALAALIFA KWRPLNIMFA CLLFGFLDAL AIRLQGTPLP LIGQVPVQLM QALPYILTVV
LLAGFIGKAI PPKAGGVPYV KER
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