Gene Smed_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3315 
Symbol 
ID5324199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3508630 
End bp3509967 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content58% 
IMG OID640792267 
Productflavin-containing monooxygenase FMO 
Protein accessionYP_001328972 
Protein GI150398505 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.803176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGAG TTGCCGTCAT CGGTGCCGGT CCATCGGGCC TTGCTCAATT GCGGGCCTTT 
CAGTCGGCCG CCCAGAAGGG CGCCGAGATT CCGGAAGTCG TATGCTATGA AAAGCAGGCC
GACTGGGGAG GACTTTGGAA TTATACCTGG CGTACCGGAC TGGACGAATA TGGCGAGCCC
GTGCATGGCA GCATGTATCG CTACCTCTGG TCGAACGGCC CCAAGGAGTG CCTCGAGTTC
GCGGACTATA CCTTCGAGGA GCATTTCGGC AAACCGATCG CTTCCTATCC GCCGCGCGCG
GTGCTGTGGG ATTATATAAA GGGTCGCGTG GAGAAGGCGA ATGTGCGCCA CTGGGTGCGT
TTCCACACGC CGGTTCGCAT GGTGCGCTTC GACGGAGAGA CGAAGAAGTT CACGGTGACC
GCTCACAATC GTCTCGAAGA CCGCATGTAT GACGAAGAGT TCGACTATGT CGTCGTTGCG
AGCGGTCACT TCTCTACACC GCAGGTCCCC TATTTCGAAG GCGTGAAGAC CTTCAACGGC
CGGGTGCTGC ATGCGCATGA CTTCCGCGAT GCGCTGGAGT TCAAGGGCAA GGACGTTCTC
ATCGTCGGCC GCAGCTATTC GGCCGAGGAT ATCGGCTCGC AATGCTGGAA GTATGGGGCG
AAATCGGTGA CGACGAGCTA TCGCTCCAAG CCGATGGGCT TCAACTGGCC GGAAAATTTC
GAGGAACGGC CACTGCTGAC GAAGCTCGAA AACACGACGG CTCATTTCGC GGACGGCTCG
ACAAAGGAAG TGGACGCGCT GATCCTGTGC ACCGGCTACC AGCACCACTT TCCCTTCCTG
CCCGACGAAC TCAGACTCAA GACCGCAAAC CGCCTTTGGG CCGACCATCT CTACAAGGGC
GTGGTCTTCG ATGGGAATCC GCAGCTCTTC TACATCGGCA TGCAGGATCA GTTCTATACC
TTCAACATGT TCGACGTGCA GGCCTGGTGG GCGCGCGATG TCATGATGGG CCGCATCGAG
CTGCCGCCGG AAGAGGAACT GAAGGCGAAT TTCGACATGT GGCGTGCCCG CGAGGAAACG
CTCGAGCATG CCGAGGAGAT GATCTGGTAC CAGGGCGACT ATGTGAAGGA ACTGCTCGCT
GAAACCGATT ATCCGAGCTT CGATATCGAA GGGGTCAACC GGACCTTCAT GAAATGGGAG
CACCACAAGG CTGAAAACAT CATGGGTTTT CGCAACCATG CCTATAGGTC GCTGATGACG
GGCAACATGT CGCCCGAACA CCACACTCCC TGGGTCGAAG CGCTTGACGA TTCGCTCGAG
GAATATCTGC GCGAGTGA
 
Protein sequence
MTRVAVIGAG PSGLAQLRAF QSAAQKGAEI PEVVCYEKQA DWGGLWNYTW RTGLDEYGEP 
VHGSMYRYLW SNGPKECLEF ADYTFEEHFG KPIASYPPRA VLWDYIKGRV EKANVRHWVR
FHTPVRMVRF DGETKKFTVT AHNRLEDRMY DEEFDYVVVA SGHFSTPQVP YFEGVKTFNG
RVLHAHDFRD ALEFKGKDVL IVGRSYSAED IGSQCWKYGA KSVTTSYRSK PMGFNWPENF
EERPLLTKLE NTTAHFADGS TKEVDALILC TGYQHHFPFL PDELRLKTAN RLWADHLYKG
VVFDGNPQLF YIGMQDQFYT FNMFDVQAWW ARDVMMGRIE LPPEEELKAN FDMWRAREET
LEHAEEMIWY QGDYVKELLA ETDYPSFDIE GVNRTFMKWE HHKAENIMGF RNHAYRSLMT
GNMSPEHHTP WVEALDDSLE EYLRE