| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3308 |
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| Symbol | |
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| ID | 5324192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3500639 |
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| End bp | 3502225 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640792260 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328965 |
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| Protein GI | 150398498 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.705056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCG GAAACAAACG CGGATTGCAG TTTGCCACGG CATTGCTGTC TTGCATGGCA
GGTTTTGCGG GCCCGGCTTC GGCTCAAAGC TCTGATCTCG TCGTCAACAG CGCGGTGGCG
CCCAGCACGC TGGATCCGGC CTGGGCCTGC GGGTTGCAGG AAATCAGTTT TCTGCAGAAT
TTCTATGTGC GTCTGGTTCA GAACGGCACC GCGGAAGGGC CCGAGGGCAC AGGGGTCGTC
GATTATTCCA AGATCGAGCC CTATCTCGCC AAGTCCTGGG AGGTCAGTGA GGATGGGTTG
GTCTACACGT TCCACCTCAA GGAAGGCTAC ACGTTCGAAA GCGGCAAGCC GGTCGATGCG
GATGCTGTTC GCTATTCCCT ACAGCGCGTG CTTGACATGG CCGGCTGCGG CCGGTTCTTC
CTGACAGACG GTCATATCGA TCCTGTCATT TTCAAGTCCA TCGAAGCGGT CGATCCGCTG
ACGGTCGAGA TCACGCTCAA CAAGCCAAAC GGCAACATGC TGGGCGATCT GGCCACCCAT
GCGGCATCGA TCGTCGATCC CTCCATCGTC GAAGCCAATG GCGGCGTCAC GCCCGGTCAG
CCGAATGAGT ACATGGCGGC AAATGTAACC GAATCCGGAC CGTTCCTTTT GGATTCCTAT
ACGGCCAACC AGAATGCTCG CCTAGTGGCC AATCCGGCTT TCGCAGGCGA AGCGCCGGCA
TCGAAGGCCA TCAACGTCAA CTGGATCACC GCCTTGCCGA CGCTTTTGCT GCAGGCACGT
ACCGGGCAGG CCGATATCAC CTTCGGCCTT GCCAAGCAGG CCGTCAAAAC CATGGTCAGC
AATGCCGGCA CGCGGGTGAT CGCCTATTCC AGTCCATTTG CCCAGCAGAT GATTCTGCCC
AATACCAAGG CACCCTGGAA CAACAAGCTT TTCCGACAAG CCGTCGCCCA TGCCGTGCCC
TATGAAAGCA TCGTTTCGCG CGTCGCCTAT GGTTACGGCA CGCAATATTA CGGACCGATT
CCGCCCAGCC TGCCCGGCTT CAACGCCGAG CTCAGCAAGC CGGTCCCCTT CGATCTCGAT
CGGGCAAAAG ATCTGATCGC CGAAAGCGGC GTGGCAACAC CCGTCGATGT CGAGGTGATG
ATCCAGGAAG GCGACGCCAC CCAGCAGCAA CTGGCCACCA TTCTGCAAAG CACTTGGAAA
GATCTCGGCA TCACCCTCAA GATCCGCGTG GCGCCGGCTG CCGAATTCCA GGACCTGTCA
CAGGGTCATC GGGTTCAGTC GCTGATGCGT CTCGACGGTC CCGGCGTGTT CGAGGTCGGC
TATTACTGGG GCTATGACGC GGTTTGCGGC AATCCCAACA ATCTCACCGA ATATTGCAAC
AAAGACATGG ATGCGCTGAT CGAGAGACTG CGCGCCTCTT CCGACCCGGC CGAGCGACAG
ACGATCATGG ACCAGGCCAC GGAAATCTGG CGTGCGGATT ATCCGAAGAT CCTGTTCTTC
GAGGATCAGC CGGTCGTCGT TCTCTCCGAT GCCGTGACCA AGTTCACCTT CTCGCCGCTC
CCCGACTATC GCTACTGGGC GAAATAA
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| Protein sequence | MRIGNKRGLQ FATALLSCMA GFAGPASAQS SDLVVNSAVA PSTLDPAWAC GLQEISFLQN
FYVRLVQNGT AEGPEGTGVV DYSKIEPYLA KSWEVSEDGL VYTFHLKEGY TFESGKPVDA
DAVRYSLQRV LDMAGCGRFF LTDGHIDPVI FKSIEAVDPL TVEITLNKPN GNMLGDLATH
AASIVDPSIV EANGGVTPGQ PNEYMAANVT ESGPFLLDSY TANQNARLVA NPAFAGEAPA
SKAINVNWIT ALPTLLLQAR TGQADITFGL AKQAVKTMVS NAGTRVIAYS SPFAQQMILP
NTKAPWNNKL FRQAVAHAVP YESIVSRVAY GYGTQYYGPI PPSLPGFNAE LSKPVPFDLD
RAKDLIAESG VATPVDVEVM IQEGDATQQQ LATILQSTWK DLGITLKIRV APAAEFQDLS
QGHRVQSLMR LDGPGVFEVG YYWGYDAVCG NPNNLTEYCN KDMDALIERL RASSDPAERQ
TIMDQATEIW RADYPKILFF EDQPVVVLSD AVTKFTFSPL PDYRYWAK
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