| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3304 |
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| Symbol | |
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| ID | 5324188 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3494864 |
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| End bp | 3495865 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792256 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001328961 |
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| Protein GI | 150398494 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.125184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACT TTCTGCTTGC ACGTATCGGA TCGGCCATCG TCACCATTTT CGGCGCCTCG
GTTCTGGCCT TTGCCGTGCT GCGCGCCGTG CCCACCAATC CCGCCCGCCT CATCGCCGGC
CCCTTCGCCA ATGACGAAGT GATCGCGCAG GTGACCGCCA ATCTCGGGCT GGATAAATCG
CTGCCCGTGC AATATCTGGA CTATGTCACC TCCTTCTTTA TCGGCGACTG GGGCTTTTCC
TATAGTGCCG GGCAGCCGGT TCTGTCGCAG ATCACCGAAC GGCTGCCGGC GAGCGCCGAA
CTTGCGCTTT ACGCGTTCCT GTTTGCCTTT TTCGGTGCTG TGCTGGTGAC GGTGCTGGTC
AGTTTTCTCA ATTCGCGCTG GCTCGACCGC TTCCTGCGGC TATTGTCCTT CATCAGCGTC
GGCGTGCCGC CTTTCTGGCT GGCGCTATTG TTCCTGATGG TGTTTTTCGA ACGGCTTGGC
TGGTTTCCCG GTCCTGTCGG CCGCGGCCCG GCACCCACCG GACTCTATAC CGGCCTGTTC
ACCATCGACT ATCTGCTGGC GGGTGATTTC GCGGGCTTCG GTACGGCGCT GCATCATCTG
GCGCTGCCGT CGATCGCACT GGCGCTTGGG CCGTTCGGCT ATCTCGTGCG GCTGTTGCGT
GCCAATCTGC TCGACATCAT CAACGAGCCC TTCGTGACGG TTCTGCATGC CAAGGGCGTG
GCGCCGATCT CGACGCATTT CCGGCACATC CTGCCCAATG CCTTCCTGCC GACATTGACC
GCCGGCGGCT TGATCCTGGC GCAATTATTG GGCGGCAGCG TGCTGGTGGA GCGCATCTTC
GTCTGGCCGG GCATCGGCAC GCTGGTGATC GACGGCATTC TCCGGCAGGA TTATGCCGTG
GTCCAGGCCT TCATCATGCT CAGCGCCATC ATCTATATCG GCGTCAATCT GCTGGTCGAC
ATTCTCTACG GCTATGTCGA TCCGCGTGTC CGGAGGAGTT GA
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| Protein sequence | MIDFLLARIG SAIVTIFGAS VLAFAVLRAV PTNPARLIAG PFANDEVIAQ VTANLGLDKS
LPVQYLDYVT SFFIGDWGFS YSAGQPVLSQ ITERLPASAE LALYAFLFAF FGAVLVTVLV
SFLNSRWLDR FLRLLSFISV GVPPFWLALL FLMVFFERLG WFPGPVGRGP APTGLYTGLF
TIDYLLAGDF AGFGTALHHL ALPSIALALG PFGYLVRLLR ANLLDIINEP FVTVLHAKGV
APISTHFRHI LPNAFLPTLT AGGLILAQLL GGSVLVERIF VWPGIGTLVI DGILRQDYAV
VQAFIMLSAI IYIGVNLLVD ILYGYVDPRV RRS
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