Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3292 |
Symbol | |
ID | 5324176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3484678 |
End bp | 3485364 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640792244 |
Product | glutamate synthase alpha subunit |
Protein accession | YP_001328949 |
Protein GI | 150398482 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0070] Glutamate synthase domain 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTGA TCGATCTCGC CACCACGCCG CTGCGTGAAC TCAACAGCGC CCTCCATAAT ATTCAGAAGG GCTCAAACGA CCTGTCCTAC GAAGTCGCCA ATCCTCGCGG CAGTCATGCC GTTGCCGTCG GGGTAAGCGG CCCCGTACTG GTCGATGTGA ACGGCTCCGT CGGCTACTAC TGCGCCGGCA TGAACGACGG CGGAACGATC ACGGTCCATG GCTCGGCAGG CCCTGGTGTC GCGGAAAACA TGATGTCCGG CAAGGTCGTC ATCGAAGGCG ACGCCAGCCA GTATGCCGGC GCGACAGGCC GCGGTGGCCT GCTCGTGATA AAGGGCAACG CGGCGTCGCG CTGCGGCATT TCCATGAAAG GCATCGATAT CGTCGTTCAC GGGAATATCG GCCATATGTC GGCTTTCATG GGTCAGTCGG GCCATCTCGT CGTGCTCGGC GACGCGGGCG ATGCACTGGG CGACAGCCTC TACGAAGCCA AGCTCTTCGT GCGCGGCACC GTCAAAAGCC TGGGCGCCGA TTGCATCGAG AAGGAGATGC GGCCGGAGCA CCTGCAAAAG CTCGCCGAGC TTCTGGAAAA GGCCGGCGTC AAGGATGTCC GCCCGGAAGA GTTCAAGCGC TACGGCTCGG CCCGCAAGCT CTACAATTTC AACATCGACA ACGCAGACGC GTATTAA
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Protein sequence | MPVIDLATTP LRELNSALHN IQKGSNDLSY EVANPRGSHA VAVGVSGPVL VDVNGSVGYY CAGMNDGGTI TVHGSAGPGV AENMMSGKVV IEGDASQYAG ATGRGGLLVI KGNAASRCGI SMKGIDIVVH GNIGHMSAFM GQSGHLVVLG DAGDALGDSL YEAKLFVRGT VKSLGADCIE KEMRPEHLQK LAELLEKAGV KDVRPEEFKR YGSARKLYNF NIDNADAY
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