Gene Smed_3292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3292 
Symbol 
ID5324176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3484678 
End bp3485364 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content61% 
IMG OID640792244 
Productglutamate synthase alpha subunit 
Protein accessionYP_001328949 
Protein GI150398482 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0070] Glutamate synthase domain 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGA TCGATCTCGC CACCACGCCG CTGCGTGAAC TCAACAGCGC CCTCCATAAT 
ATTCAGAAGG GCTCAAACGA CCTGTCCTAC GAAGTCGCCA ATCCTCGCGG CAGTCATGCC
GTTGCCGTCG GGGTAAGCGG CCCCGTACTG GTCGATGTGA ACGGCTCCGT CGGCTACTAC
TGCGCCGGCA TGAACGACGG CGGAACGATC ACGGTCCATG GCTCGGCAGG CCCTGGTGTC
GCGGAAAACA TGATGTCCGG CAAGGTCGTC ATCGAAGGCG ACGCCAGCCA GTATGCCGGC
GCGACAGGCC GCGGTGGCCT GCTCGTGATA AAGGGCAACG CGGCGTCGCG CTGCGGCATT
TCCATGAAAG GCATCGATAT CGTCGTTCAC GGGAATATCG GCCATATGTC GGCTTTCATG
GGTCAGTCGG GCCATCTCGT CGTGCTCGGC GACGCGGGCG ATGCACTGGG CGACAGCCTC
TACGAAGCCA AGCTCTTCGT GCGCGGCACC GTCAAAAGCC TGGGCGCCGA TTGCATCGAG
AAGGAGATGC GGCCGGAGCA CCTGCAAAAG CTCGCCGAGC TTCTGGAAAA GGCCGGCGTC
AAGGATGTCC GCCCGGAAGA GTTCAAGCGC TACGGCTCGG CCCGCAAGCT CTACAATTTC
AACATCGACA ACGCAGACGC GTATTAA
 
Protein sequence
MPVIDLATTP LRELNSALHN IQKGSNDLSY EVANPRGSHA VAVGVSGPVL VDVNGSVGYY 
CAGMNDGGTI TVHGSAGPGV AENMMSGKVV IEGDASQYAG ATGRGGLLVI KGNAASRCGI
SMKGIDIVVH GNIGHMSAFM GQSGHLVVLG DAGDALGDSL YEAKLFVRGT VKSLGADCIE
KEMRPEHLQK LAELLEKAGV KDVRPEEFKR YGSARKLYNF NIDNADAY