| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3278 |
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| Symbol | |
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| ID | 5324157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3461244 |
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| End bp | 3462470 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640792226 |
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| Product | putative ABC transporter solute-binding protein |
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| Protein accession | YP_001328937 |
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| Protein GI | 150398470 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAGGC TGGTCGGAAA AATGATCGCC GCGGCAATGC TGTCGCTTGG CCTCGCCGCG
GGGGCCTTCT CCGCGGACCC AGGCAAGTGG AAAGCGGTCG TTGCACAAGC CAGGGGTCAG
ACGGTCTATT TCAACGCCTG GGGAGGCGCT GCAAATATCA ACGCCTACAT CGAATGGGCC
GGCGACGAGA TGAAGAGCCG TTACGGCGTG ACCGTCGTTC ATGTGAAGCT CGACGACACC
GCCAAAGCGG CCGGGACTGT GCTTGCGGAG AAAGCGGCAG GAAAAGACGA GCACGGCGCG
GTCGATCTGG TGTGGATCAA CGGCGAGAAT TTCGCCGCCA TGAAGCGTGA AGGGCTGCTT
TACGGGCCCG ACTGGGCAAC GAAACTGCCG AACTGGCGCT ATGTCGACAC GGAAAACAAG
CCGACGGTGC TGACCGATTT TACCATTCCG ACCGAAGGGC TGGAGAGCCC CTGGGGCGGC
GCCAAGCTCG TGTTCTTCTA CGATCAGGCG CGCACCCAGG CGACCGAATT GCCTGATTCC
GCGGCGGATC TTCTGAAATG GGCTGAAGCC AATCCAGGGC GCTTCTCCTA CCCGCAACCA
CCGGATTTCA CCGGATCTTC CTTCCTGAAG CAGGTGCTGA GCGAAGTCGT CTCGGACAGG
AGCAAGCTGC AGACACCCGT TGACGACGCT ACTTTCGATA CGGATGTGGC GCCCTTGTTT
GACTATCTCG ACAAGCTCAC GCCGCACTTG TGGCGAAAGG GCAAGGCCTT CCCGCAGAAC
TATGCGGACA TGAAGCAGAA GCTCGCCGAC GGCGAGCTCG ACATCATCTT CGCCTTCAAC
CCCGCAGAAG CCTCCTCCGC CATCGCCGAT GGCGAGCTGC CGGAAACGGT GCGTTCCTTC
GTCTTTTCAG GCGGCACGCT TGGTAACACG CATTTCGTCG CCATTCCCTA CAATGCGACG
GCGAAGGCCG GCGCGCTTCT GCTTGCCGAT TTTCTCCTCT CGCCCGAGGC ACAGCTTCGC
AAGCAGGACC CGAAGGTCTG GGGGGATCCC ACAGTTCTCT CCCTCTCAAA ACTTCCGGCA
GCCGACCGAT CCGCCTTCGA GCGTCTGGAG CTCGGCATTG CAACGCTTCC TCCCGACAAA
CTTGGTCCCG CGCTCGACGA ACCGCATCCG GACTGGATGA CACGGATCGA AACCGAGTGG
ATCCGGCGCT ATGGCGCGGC CAACTGA
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| Protein sequence | MIRLVGKMIA AAMLSLGLAA GAFSADPGKW KAVVAQARGQ TVYFNAWGGA ANINAYIEWA
GDEMKSRYGV TVVHVKLDDT AKAAGTVLAE KAAGKDEHGA VDLVWINGEN FAAMKREGLL
YGPDWATKLP NWRYVDTENK PTVLTDFTIP TEGLESPWGG AKLVFFYDQA RTQATELPDS
AADLLKWAEA NPGRFSYPQP PDFTGSSFLK QVLSEVVSDR SKLQTPVDDA TFDTDVAPLF
DYLDKLTPHL WRKGKAFPQN YADMKQKLAD GELDIIFAFN PAEASSAIAD GELPETVRSF
VFSGGTLGNT HFVAIPYNAT AKAGALLLAD FLLSPEAQLR KQDPKVWGDP TVLSLSKLPA
ADRSAFERLE LGIATLPPDK LGPALDEPHP DWMTRIETEW IRRYGAAN
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