| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3243 |
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| Symbol | |
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| ID | 5324122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3420427 |
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| End bp | 3423606 |
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| Gene Length | 3180 bp |
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| Protein Length | 1059 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640792191 |
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| Product | double-strand break repair protein AddB |
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| Protein accession | YP_001328902 |
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| Protein GI | 150398435 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGGAC ATCCGAACGT CTTCACGATT CCCGCTGGCC TGCCCTTTCT GAGGACGCTG
GCGGAAAAGC TATGCGACGG CAAACTGACG GCCGGCTTCC GCTACGATCC AACCGAGCCG
CTGGCGCTCG CCGGCGTCAC GATTTTCGTG CCGACCCGGC GCTCCGCCCG GGTGCTGCGC
TCGGAATTCG TCGACCTGCT CGGCGGCCGT TCGGCGATCC TCCCGGTGAT CCGCGCGCTC
GGTGAGACCG ATGACGACAG CGGCTTCTTC GACACGCAAT TGCCGGCGAT TCTCGACCTT
GCGCCGCCGC TTTCCGGAAC GGCCAGGCTC ATAGAGCTCG GCCGCCTCAT TCTCGCCTGG
CGCAACCGTC TGCCGCAGGT GGTCCTCGAC ATTCATGCCG AAAGTCCGCT GATCGCACCG
GCGAGCCCCG CCGACGCTAT CTGGCTCGCG CGAAACCTAG CCGAACTCAT CGACGCGATC
GAGACAGAGG AACTCGATTG GGATGCGCTT GACGGGCTCG ATGGCGGCGA ACATGCGCTC
TGGTGGCAAC TGACGCTCGC CTTCCTCAAG ATAGCCCGGA CCTATTGGCC GGAGCGGCTG
GCGGAGCTCA AGCACTCCTC GCCCGCGCGC CACCGCAATG CCGTGCTGAA GGCCGAAACC
CAGCGCATCG CTGCCGGAAA AGTGACCGGA CCTATCATCA TCGCCGGCTC GACCGGCTCG
ATCCCGGCAA CGGCCGCCCT GATCGCTGCG GTGAAGGCTT TGCCGCACGG TACGATCGTG
CTTCCAGGGC TCGACGGGAC GATGAGCAAT GCGGAGTGGC AGCTGATTGC CGGCGAGGCG
GACGGCGCTG GAGCCTTCTC AAGGAACCCG GCAAGCCGTA CCCATCCGCA GTATGGATTC
CACCGCCTGC TAAGGCGCAT GGGTATCGAA CGCGACGATG TGCCTGCCCT CGCCTCCGCT
CCCGACGACC TCGATTGCCG GAGCGCAGTC CTGTCGCGGG CGCTGTTGCC GGCCGACGCG
ACGAACGTCT GGATGCAGGC ACGCCTGAGT TTCGAGCCGG GGCGGCTCTT CTCCGCCTTT
GCGGGCGTGG CGCTGATCGA GGCGGCGAAC GAACGCGAAG AGGCAACCGC CATCGCGATT
GCGCTCCGCC TCGCCCTCGA GGGCGACGAG GAGAGCCAGG CGGCGCTCAT CACGCCCGAT
CGCGACCTTG CGCGTCGCGT CGGTGCCGAG CTCGCCCGCT TCGGTATAGA GGCGGACGAT
TCCGCCGGAA TTCCGCTCTC CGCGACGGCT GCGGGTACGC TTGCCCGGCT GATGCTGGAA
GCGACGCTCA GGCCGGATGA TCCCGTTGCT CTGGTGGCAC TTCTCAAGCA TCCGCTGGCT
CGCTTCGGCG GCTCCGCGAA AGATGCGCGC CGCGCTGCGG ACGTATTGGA GCTTGTCGCC
CTGCGCGGCG GCACGGACGT GGTCGACATA TCGGCCTTGG AACCGGTCCT CGACAAGGCG
CTTGCCAAGC ATCAGGCCGA GCGCCACCCG CCGCCCTGGA GAAACGGTAT CGGCCTGGAC
GACATTGCGC TGGCACGGGC GCTCGCCCGC CGGATAGCGA CGGCCGTCGA ACCTCTGGCC
AGTACCCTCT CTGCCGACGC GGAGATCGGC CGTCATCGCT CGACCGTTCT TTCGCTTTCC
GATTGGGCCG AGCGCACGGG GCGAGCATTG GAAGCCGTCG CCGTCGACGA GCGGGGCAGC
CTCGGCGATC TTTGGGCATC GGAAGCCGGC GAAACATTGT CGACGCTGCT CAGAGGCATC
ATGGAAACCG ACGGCCAGAT GGAGTCCGAT GGGGCGCAAT GGTGCGATAT TCTCGAGGCG
CTTGCCGCAA GCGAAGCGGT CAAGCCGCGA TCCATGCGCC ACCCCCGCGT GTTCATTTTC
GGCGCACTCG AATCGCGCCT GCAAAGCGTG GACCTCGTCG TGCTTGGCGG GATGAACGAG
GGGACCTGGC CCCGACAGAC ATCGAACGAT CCGTTTCTTT CAAGGACGAT GAAGGCGGGC
ATCGGACTGG AGCCGCCGGA GCGGCGTATC GGTCAGCTCG CGCATGATTT CCAGATGGCG
TGCGGGACGC GCAAGCTGAT CTTCTCGCGT TCCATGCGTC AAGGCTCGGC GCCGACGGTG
GCGTCCAGAT GGCTGCAACG CCTGCAGGCG CTCGGCGGCG AGAGGCTGAC GAAGCAGTTA
AGGGCCAATG GCGCGAACTA TCTTCACTGG ATGCGCATTC TCGACTACGG CGAGCGTCAG
CCACTGTCGG AGCGTCCGGA GCCGAAGCCC CCGGCGGAAC TGCAGCCGCG CAAATATTCT
TTCAGCGAAA TAACGCGCCT TCGCCGCGAC CCCTACGCCG TCTACGCGCG GCGGATCCTG
CGGCTGGAGC CGATCGATCC CTTCAACCGC GATCCCGGTG CGGCCGAACG CGGCCAGCTC
TATCACCGGA TCGTCGAACG CTTTGTGAAG GGCGGCTTCG ACCCTGCATC GCGGGAGGGC
GAGGAGGCGA TGATCCGGCT CACCGACGAG GCCTTCGACG AGGAGAAACT ACCTGCGCAT
ATCGACACAA TCTGGCGGCC GCGCTTCCAG GCGGTCGGAA GGGCGTTTCT CGGCTGGGAA
CGGGAGCGCC GGCGCGGCGT TTCACGATCC TTCACCGAGG TCCCGGCAGC TATGGATCTC
GGCACCGCCG ACATCCGGCT GACCGGCATC GCCGACCGGC TGGATCGGCT TACGGATGGA
ACGATCGACA TCATCGACTA CAAAACCGGA TCGAGCCCCT CGCCGAAGGA GGCGCGGGCT
CTTTTAGACC CGCAACTTGC CCTCGAGGCG GCGGCGCTCA GGGCCGGGGC ATTCCATACG
GTGGGCGCGG CCAGGCCGCA TTCGCTGCGC TACGTTCGAT TGAAGCCGGG CGCCCGCTTC
GCCGTCGACA CCGTCAACAA TGAAGGCGCC CGCTCGAAGG AGACGAAATC CACCGAACAA
TTGGCGGACG AGGCACTCGC CGAACTCAGG AAGCTGCTCG CTGCCCTCGT CAGCGGCAGA
CACGGCTTCG CCTCGCGGCT GATCGTCCAA AAGCAGCGCG ATTACGGCGG GGAATACGAT
CATCTGGCAC GCGTCGCCGA ATGGGCAACC GCGGATGGCG AGGACGATGA TGAGGAGTGA
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| Protein sequence | MSGHPNVFTI PAGLPFLRTL AEKLCDGKLT AGFRYDPTEP LALAGVTIFV PTRRSARVLR
SEFVDLLGGR SAILPVIRAL GETDDDSGFF DTQLPAILDL APPLSGTARL IELGRLILAW
RNRLPQVVLD IHAESPLIAP ASPADAIWLA RNLAELIDAI ETEELDWDAL DGLDGGEHAL
WWQLTLAFLK IARTYWPERL AELKHSSPAR HRNAVLKAET QRIAAGKVTG PIIIAGSTGS
IPATAALIAA VKALPHGTIV LPGLDGTMSN AEWQLIAGEA DGAGAFSRNP ASRTHPQYGF
HRLLRRMGIE RDDVPALASA PDDLDCRSAV LSRALLPADA TNVWMQARLS FEPGRLFSAF
AGVALIEAAN EREEATAIAI ALRLALEGDE ESQAALITPD RDLARRVGAE LARFGIEADD
SAGIPLSATA AGTLARLMLE ATLRPDDPVA LVALLKHPLA RFGGSAKDAR RAADVLELVA
LRGGTDVVDI SALEPVLDKA LAKHQAERHP PPWRNGIGLD DIALARALAR RIATAVEPLA
STLSADAEIG RHRSTVLSLS DWAERTGRAL EAVAVDERGS LGDLWASEAG ETLSTLLRGI
METDGQMESD GAQWCDILEA LAASEAVKPR SMRHPRVFIF GALESRLQSV DLVVLGGMNE
GTWPRQTSND PFLSRTMKAG IGLEPPERRI GQLAHDFQMA CGTRKLIFSR SMRQGSAPTV
ASRWLQRLQA LGGERLTKQL RANGANYLHW MRILDYGERQ PLSERPEPKP PAELQPRKYS
FSEITRLRRD PYAVYARRIL RLEPIDPFNR DPGAAERGQL YHRIVERFVK GGFDPASREG
EEAMIRLTDE AFDEEKLPAH IDTIWRPRFQ AVGRAFLGWE RERRRGVSRS FTEVPAAMDL
GTADIRLTGI ADRLDRLTDG TIDIIDYKTG SSPSPKEARA LLDPQLALEA AALRAGAFHT
VGAARPHSLR YVRLKPGARF AVDTVNNEGA RSKETKSTEQ LADEALAELR KLLAALVSGR
HGFASRLIVQ KQRDYGGEYD HLARVAEWAT ADGEDDDEE
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