| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3228 |
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| Symbol | |
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| ID | 5324107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3403680 |
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| End bp | 3405233 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640792176 |
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| Product | ABC transporter related |
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| Protein accession | YP_001328887 |
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| Protein GI | 150398420 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGGC TTCAAGAGGT CAGCCATCGC CATGACGATC AGGTGAGGGC GGCAGGCAGC
CATCCCGTTC CGAAGGGTGA GCCCATTCTG GAGCTGCGCG GCCTGCAGAA AAACTACGGT
GCGGTAGAGG CGCTGAAACC CGCGAACATG ACCTTCCTCT CGGGCGAGGT ACACGCGATC
GTCGGCGAGA ATGGAGCCGG CAAATCGACG CTCATCAAGC TCCTGACCGG GGTCATTGCC
CGCAGTGCCG GAGAGGTCCG CTGGTGCGGT GAAACGGTCG AGCTCGCCAC GCCCAACGAG
GCGATCGCGC GCGGCATCAA CGCGGTTCAT CAGGAGGTGG TTCTATGCCC CCATTTGAGC
GTTGCGGCGA ACATGTTCCT GGGCGACGAG ATGAGCCGGC GCGGGGTGAT GCGCAAGCGT
GCGATGACCG ATGCGGCCCA GGGCGTGCTC GACGACCTCG GTTTCAATCT TCCGGCAAAT
GCCGAACTAG GCAGCCTGAC GATCGGCCAG CAGCAGCTGG TCGCAACCGC GCGGGCGGCG
ATGCGCGGCA CGCAGTTTCT CATCTTCGAC GAGCCAACCG CCTATCTCAC ACGACAGGAG
TCCGCCCAGC TGTTCCGCCT CATTCGCCGG CTGCAGAGCG AAGGCGTGAC GATCGTTTAT
ATCAGCCACC GGTTGGAAGA AGTGTTCGAG CTCGCCGACC GGGTTTCGGT GCTGCGCGAC
GGCACGCATG TCGGCACGCG CGCAATTTCC GAGACGAACG AAACCGAACT GATCGCCCTG
ATGATCAACC GTTCGATCGA GCAGATCTAT CACAAGGAGC ATTTCGAACG GGGCGAAACG
ATCGTCGAGA CGCGCGGCCT GTCCGGCCCC GGTTTTCGCG AGATATCGCT TTCGGTCAGG
GCCGGTGAAA TCGTCGGTCT CTACGGTCTG ATCGGCGCCG GCCGGAGCGA ATTCGCACTC
GGCCTTTACG GGCGCAATCC GGTGAGTGGC GGAGAGATAT TCTGGCAGGG CCGCAAGACC
GCCATAGCCA ACGAGCGGGA TGCGATGGAA CTCGGGATCG CGCTGGCGCC GGAGAGCCGG
CGCGACCAGG GCTTGTGCCT CAACCTGCCG ATCGGCCTCA ACATCAACTT GCCCGTTTTC
AAGAGGCTGA CACGCGGCTT GACGATTAAC CGCGCCGAGG AGGCCTCCAA TGCCGACCGT
CAGATCAGAG ACCTAAATAT CAAGACGCCG TCGCGGCGCG TGCTCGCCTC CGCCATGTCC
GGAGGCAACC AGCAGAAGAT CGTGATCGGC AGATGGCTGA GCCATGGCGC AAAGCTCTTC
ATCTTCGATG AGCCGACCGT CGGTGTCGAC GTCGGCACCA AGGCGGAAAT CTACCGGCTC
TTTGCGCGGC TTCTGGAGAA TGGTGCGGGG ATCATCCTGA TCTCCTCCTA TCTGCCGGAG
GTCTATGAGC TTGCCGACCG TCTGCACGTG TTCAGGCAGG GGCGGCTTGT GGCGAGCCAC
GATTACCGTG GCGCTAGCCA TGAGGAAGTA CTCGCGCAGG CGATCAATGC CTGA
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| Protein sequence | MIGLQEVSHR HDDQVRAAGS HPVPKGEPIL ELRGLQKNYG AVEALKPANM TFLSGEVHAI
VGENGAGKST LIKLLTGVIA RSAGEVRWCG ETVELATPNE AIARGINAVH QEVVLCPHLS
VAANMFLGDE MSRRGVMRKR AMTDAAQGVL DDLGFNLPAN AELGSLTIGQ QQLVATARAA
MRGTQFLIFD EPTAYLTRQE SAQLFRLIRR LQSEGVTIVY ISHRLEEVFE LADRVSVLRD
GTHVGTRAIS ETNETELIAL MINRSIEQIY HKEHFERGET IVETRGLSGP GFREISLSVR
AGEIVGLYGL IGAGRSEFAL GLYGRNPVSG GEIFWQGRKT AIANERDAME LGIALAPESR
RDQGLCLNLP IGLNINLPVF KRLTRGLTIN RAEEASNADR QIRDLNIKTP SRRVLASAMS
GGNQQKIVIG RWLSHGAKLF IFDEPTVGVD VGTKAEIYRL FARLLENGAG IILISSYLPE
VYELADRLHV FRQGRLVASH DYRGASHEEV LAQAINA
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