Gene Smed_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3218 
Symbol 
ID5324097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3392065 
End bp3392640 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content65% 
IMG OID640792166 
ProductSmr protein/MutS2 
Protein accessionYP_001328877 
Protein GI150398410 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGGG AAAAGAAACT CTCCGCCGAG GACCGGATTC TCTGGGGGAA GGTGGCGCGC 
TCGGCGCGCC CGATGCCCGG GCGGCTGGAT GATCTCGAGG AACTGCTCGG CGGGGCGGCG
GAAATCAAGG CCGTGCCTGG TCCGGAGGCG GACTCCTCGA GCGCCCCCGA GAAGATCGAC
AGAGGCTTTT CGATCAGCCG GGAGAAAATG GAACAGCGCC CGCATCATCC GCTGGAGCGG
CCGGTCAAAC GCAAGCTCGC TAAGGGCAGG TTGACGCTGG AGGCCCGTAT CGACCTTCAC
GGCATGATCC AGAGCGAGGC GAACGGCCTG CTGCTGCAGT TCCTCCTCAG AGCGCGGGAG
CGCGGTATGC GTCATGTCCT TGTCATAACC GGCAAGGGCA CATCCCTTGG CAGCGACGGC
GCCTTGAAGC GCGCGGTGCC GTTCTGGTTT TCGCTGCCGG AGTTCCGGCC GTTGATTTCG
TCCTACGAAC CGGCAGCGCG CAATCATGGC GGCGAGGGGG CGTTGTATGT GCGGCTGGCG
CGGGCGAAGG AAGCGCGTCA TGACCCCATT CGGTGA
 
Protein sequence
MAREKKLSAE DRILWGKVAR SARPMPGRLD DLEELLGGAA EIKAVPGPEA DSSSAPEKID 
RGFSISREKM EQRPHHPLER PVKRKLAKGR LTLEARIDLH GMIQSEANGL LLQFLLRARE
RGMRHVLVIT GKGTSLGSDG ALKRAVPFWF SLPEFRPLIS SYEPAARNHG GEGALYVRLA
RAKEARHDPI R