| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3208 |
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| Symbol | hemE |
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| ID | 5324087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3383576 |
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| End bp | 3384607 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640792156 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001328867 |
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| Protein GI | 150398400 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGAA CGCATCGCAA AGTGCTAGAG GTTTTGAACG GGAGATCGCT CACGCCTCCC
CCCATCTGGC TGATGCGGCA GGCTGGACGC TACCTCCCCG AATACAGGGC AACCCGGATA
AAGGCCGGAA GCTTCCTCGA CCTCTGCTAC ACACCCGAGC TTGCAGTCGA AGTGACATTG
CAGCCGATCC GCCGCTACGG CTTCGATGCC GCGATCCTCT TCTCCGATAT TCTGGTCGTT
CCCGATGCAC TCAATCGAAA TGTTCGCTTC GAAGAGGGGC AGGGACCGCG GATGGATCCG
ATCGACGAGG ACGGTATAGC GCAGCTGAGC CAGACAGGCG TCATCGAGCA CCTTGCCCCG
GTCTTCGAGA CGGTCTCTCG ACTCAGGGGC GAATTGGCGG CGGAAATCAC GCTGCTCGGC
TTTTGCGGGG CGCCCTGGAC CGTGGCGACC TATATGATCG CCGGTCGCGG GACGCCAGAC
CAGGCGCCGG CGCGCCTCTT CGCCTATCGT CATCCCAAGG CCTTTGAACG GCTTCTGGCG
CTGCTTGCCG ATATTTCCGC CGACTACCTG GTCGAACAGA TCGATCGCGG TGCGGATGCG
GTGCAAATCT TCGACTCCTG GGCCGGTGTG CTCGGCGAGG AAGAATTCCA ACGTTACGCG
GTGGAGCCTG TCCGGCGCAT CATCGCCTCG GTCCGGTCCC GCCGGCCTTC GGCGAAAATC
ATCGCCTTTG CGAAAGGCGC CGGCATCCTG TTGAAGAACT ATCGGCAAGC GACCGGCGCG
GACGCAATCG GCCTCGATTG GTCGGTGCCG CTCTCCTTCG CAGCGGAGCT GCAGAAGGAC
GGGCCGGTTC AGGGCAATCT CGATCCGGTG CGGGTCGTGG CCGGTGGCGC GGCGCTGGAG
CATGGAATCG ACCGTATCCT GGACGTCCTC GGGCAAGGGC CGCTGATCTT CAATCTGGGC
CACGGCATCA CGCCGGACGC GGATCCGGAG CATGTCGCCG CGCTTGTGTC TCGCGTCCGA
GGACGCCGAT GA
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| Protein sequence | MSGTHRKVLE VLNGRSLTPP PIWLMRQAGR YLPEYRATRI KAGSFLDLCY TPELAVEVTL
QPIRRYGFDA AILFSDILVV PDALNRNVRF EEGQGPRMDP IDEDGIAQLS QTGVIEHLAP
VFETVSRLRG ELAAEITLLG FCGAPWTVAT YMIAGRGTPD QAPARLFAYR HPKAFERLLA
LLADISADYL VEQIDRGADA VQIFDSWAGV LGEEEFQRYA VEPVRRIIAS VRSRRPSAKI
IAFAKGAGIL LKNYRQATGA DAIGLDWSVP LSFAAELQKD GPVQGNLDPV RVVAGGAALE
HGIDRILDVL GQGPLIFNLG HGITPDADPE HVAALVSRVR GRR
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