Gene Smed_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3207 
Symbol 
ID5324086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3383037 
End bp3383579 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content58% 
IMG OID640792155 
Producthypothetical protein 
Protein accessionYP_001328866 
Protein GI150398399 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGGCG AACGTCAAAC CGACCGCGGC CCCGGCAGAC GGGCGCGGTT TCGGGCTGCT 
ATCGCGCTTT CCGCCTTTAC GGCCTTGCTG ATCGGCCTCT TCGCTTGGCA GCCGGACGAT
TTCTATCTTT GGATCAAGGC GCTTCACGTC ATCGCGGTGA TCTCATGGAT GGCGGCCCTT
CTCTACATGC CGCGCCTCTT CATCTACCAC ACCGACGCCG CACCGGGATC GGAGCAGTCG
GAGACCTTCA AGATGATGGA ACAGCGGTTG CTCAAGGTCA TCATGAACCC GGCAATGATG
ATCTCCTGGG TGCTTGGTCT TTACCTCGCC TGGGGCGTTT ACGGTTTTCA CGGGGGGTGG
CTCCATGCGA AGATTTTCTG CGTTTTTCTG CTGACCATGG TACATGTGCA TTTCAGCCGC
GCAGTCAAAG TCTTCCAGCG AGACGAGAAT CGCCGGGATG CCCGCTACTG GAGGCTGATG
AACGAGGCCC CGACCCTGCT GATGATCGTC ATTGTCATCC TCGTTGTCGT GAAGCCATTT
TGA
 
Protein sequence
MRGERQTDRG PGRRARFRAA IALSAFTALL IGLFAWQPDD FYLWIKALHV IAVISWMAAL 
LYMPRLFIYH TDAAPGSEQS ETFKMMEQRL LKVIMNPAMM ISWVLGLYLA WGVYGFHGGW
LHAKIFCVFL LTMVHVHFSR AVKVFQRDEN RRDARYWRLM NEAPTLLMIV IVILVVVKPF