| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3183 |
|---|
| Symbol | |
|---|
| ID | 5324062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3348875 |
|---|
| End bp | 3349696 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640792131 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_001328842 |
|---|
| Protein GI | 150398375 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGG TGAAGATCGC AGCAGCCGGC CTTGCGGCCC TTATCTCAAT CGCAGTTCTC
CCGGGATCCG CCAGCGCGGC TCAGTGCGGC AATGACGGGA GCGGTTTCTC GGCCTGGCTG
TCGGAGTTTA AGCGCGAAGC CGCAGGGAAC GGCATCAATC CTTCCGTTGT CGAGCAGGCG
CTCGCCAACG TCTCCTACAG CAGAGCAACG ATTCGCGCCG ATCGCGGCCA GAAGAGCTTC
AAGCTGTCGC TCGACCAGTT CATGCAGAAG CGCGGCGGCC AGGTCATCAT TTCGCGTGGC
AAGAAGTTGC GGGCGCAAAA TGCCCGGCTC TTCCAGAGCA TCGAGCAGCG CTACGGCGTC
CCCGCCGGCC CGTTGATCGC CATCTGGGGC ATGGAGACCG GCTTCGGCTC GTTCTTGGGC
AAGGAGCACA CGCTCTCGGC CGTCTCGACG CTCGCCTATG ACTGCCGCCG TTCGGATTAT
TTCACCAACC AGCTTTACGC CGCCCTCCAG CTCGTCGAGC GCGGCGATCT CAGCCCGGCG
GCCCGCGGGG CGGCCCACGG CGAAATCGGC CAGACCCAAT TTCTCCCGGT GAACGTTCTG
AAATACGGCG TGGACGGCGA CGGCAACGGC CATGTCGACA TGGTCCGCTC CAAGGCGGAC
GCGCTTGCCT CGACTGCAAA TTTCCTGCGC GGACACGGCT GGCAGCCGGG CGGCGGCTAT
CAGCCGGGCC AGGTCAACTT CGCCGCCATT CAGGGCTGGA ACGCTGCCAG CGTCTACCAG
CAGGCGATCG CCATCATCGG CGCCGCAATA GATGGTGGCT GA
|
|---|
| Protein sequence | MHKVKIAAAG LAALISIAVL PGSASAAQCG NDGSGFSAWL SEFKREAAGN GINPSVVEQA
LANVSYSRAT IRADRGQKSF KLSLDQFMQK RGGQVIISRG KKLRAQNARL FQSIEQRYGV
PAGPLIAIWG METGFGSFLG KEHTLSAVST LAYDCRRSDY FTNQLYAALQ LVERGDLSPA
ARGAAHGEIG QTQFLPVNVL KYGVDGDGNG HVDMVRSKAD ALASTANFLR GHGWQPGGGY
QPGQVNFAAI QGWNAASVYQ QAIAIIGAAI DGG
|
|---|
| |