Gene Smed_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3174 
Symbol 
ID5324053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3337191 
End bp3338192 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content65% 
IMG OID640792122 
Productoxidoreductase domain-containing protein 
Protein accessionYP_001328833 
Protein GI150398366 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCT GGGGATTGAT CGGTGCGAGC ACCATTGCGC GTGAATGGGT GATCGGCGCC 
ATCCGCGCAT CAGGTGGCGA GGTCGTGTCG GTGATGAGTT CGAGCGCGGA GCGGGGACGG
GCTTACGCTG CGGAAAACAG CATTGGAAGA TCCGTGACGA GCCTGGACGA GCTTGTCGGC
GACCAGGACG TGGATGCCGT CTACATCTCG ACCACAAATG AGCTTCACCA CGGACAGGCG
CTTGCGGCAA TCCGCGCCGG CAAGCACGTG CTCTGCGAGA AGCCCTTGGC GATGAGCCTC
AACGACGGCT GCGAAATGGT CCTCAAGGCC TGCGAGGCCG GTGTCGTGCT CGGCACGAAC
CATCACTTGC GCAATGCCGC CACGCATCGG GCGATGCGGG AGGCGATCGC GGCGGGCAAG
ATCGGCAGGC CGATCGCAGC GCGGGTATTC CATGCCGTCC ATCTGCCGCC GCACCTGCAG
GGGTGGCGGC TCGACAAGCC CGAGGCCGGA GGCGGTGTCA TCCTCGACAT TACGGTCCAC
GATGCCGATA CGCTGCGCTT CGTGCTGGAC GACGATCCGA TCGAGGCCGT CGCGATCAGC
CACAGTGCCG GAATGGGTAA GGAGGGGCTC GAGGACGGCG TCATGGGTGT GCTTCGTTTC
CGTTCCGGCG TCATTGCCCA GTTCCACGAC GCCTTCACCA CGAAATATGC CGAGACGGGG
CTTGAAGTGC ATGGAACCGC AGGATCGCTT ATCGGCCGCA ATGTGATGAC GCAGCGACCC
GTCGGTACGG TCGTGCTCCG CAATGAGGAA GGCGAGAGCG AGCTGCCGCT CGACCATCGC
AATCTCTACG AGACGGCGCT TTCCGCCTTC CATTCCGCGA TCGAGGGTCA GGGCCGTCCG
TCGGCCAGCG GCGAGGATGG GGTCTGGTCG CTCGCCACCG GTCTGGCGGT AGTCAAAGCG
GCGGCGACTG GCGCGGCCGT CGAGATCGAA ACGGGACTCT GA
 
Protein sequence
MIRWGLIGAS TIAREWVIGA IRASGGEVVS VMSSSAERGR AYAAENSIGR SVTSLDELVG 
DQDVDAVYIS TTNELHHGQA LAAIRAGKHV LCEKPLAMSL NDGCEMVLKA CEAGVVLGTN
HHLRNAATHR AMREAIAAGK IGRPIAARVF HAVHLPPHLQ GWRLDKPEAG GGVILDITVH
DADTLRFVLD DDPIEAVAIS HSAGMGKEGL EDGVMGVLRF RSGVIAQFHD AFTTKYAETG
LEVHGTAGSL IGRNVMTQRP VGTVVLRNEE GESELPLDHR NLYETALSAF HSAIEGQGRP
SASGEDGVWS LATGLAVVKA AATGAAVEIE TGL