| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3140 |
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| Symbol | |
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| ID | 5324019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3292227 |
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| End bp | 3292967 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640792090 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_001328801 |
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| Protein GI | 150398334 |
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| COG category | [K] Transcription |
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| COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCA CGTTGCTCGT ACAGTTTCTG GCGCTTCTGG AAGAGATGAA GACGCGCGAG
GAGATTCTGC CCGAGTTCGA GCGCCTGCTC GACCGCTGCG GCTTCGATTT TTACGGTGTC
GTGCGTCAGC CGAAACCGCA TGAGAATCCA CTCAGGCTCC TTCTGGCCGG ACGCTGGCCG
GAGGGTTGGC CGCAAATTTA CATTCGCAAG AAATACGTCG TCATAGATCC TACGATCCGC
TTCCTCGGAC ATGCCCAGCG CGGTTTCCGC TGGCGCGACA CGCTCGTGGC CTTCCGTTCG
GACCCGCACC GCAAGCGCAT GGAAAGCATG ATGATCGAGG CACGCAATCA CGGCCTCTTC
GACGGCTACA TTTTTCCGGT GCACGGCCGC CGCGGACTCA TGGGCAATCT GACGGTAGGG
GGGCGGGTGG TCGATCTGAG CCCGGTGGAA TTGAGCCTTT TCGACGCCAT CGCAAAGCGG
CTGTTCTGGA AGCTGCTCGA ACTCACCGAT CCGGAGATCA TGGCGGAGCT CGTCTCGCGC
GTCGAAGTCC AGATGACGCG GCGTGAAATG GAAGCGCTCC ATTACCTCGC CGACGGCATG
ACGTCGAACG ACATCGGCAA GGTCCTGGAT ATTTCGAGCC ATACCGTCGA CTGGTACATG
AACGGCATTC AGGAAAAACT GAAGGCGAAA AACCGGCACC ATGTGGTGGC GCTCGCCTTC
CGCCTGGGAC TGATCTCGTG A
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| Protein sequence | MNITLLVQFL ALLEEMKTRE EILPEFERLL DRCGFDFYGV VRQPKPHENP LRLLLAGRWP
EGWPQIYIRK KYVVIDPTIR FLGHAQRGFR WRDTLVAFRS DPHRKRMESM MIEARNHGLF
DGYIFPVHGR RGLMGNLTVG GRVVDLSPVE LSLFDAIAKR LFWKLLELTD PEIMAELVSR
VEVQMTRREM EALHYLADGM TSNDIGKVLD ISSHTVDWYM NGIQEKLKAK NRHHVVALAF
RLGLIS
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