Gene Smed_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3114 
Symbol 
ID5323993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3261454 
End bp3261867 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID640792064 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001328775 
Protein GI150398308 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00552893 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAC AGCCGCCGTC CGCCCCTGCA ACGCGTCAGC GGCTCGACAA ATGGCTGTTC 
TTTGCCCGGC TGATCAAATC GCGCTCGCTC GCTCAGAAGG CGATCGAGGC CGGTCACGTG
GTGGTCAACG GCAAACGTGA AACGCAATCG TCCGCCCAGA TAAAGGCCGG AGACATGCTC
GAAGTGTCGC TGGAGCGGCG CGATCTGGTC TTGCGGGTGC TGCTGCCTGG GTCCCGCCGA
GGGCCCTACG AGGAAGCCCG TCTGCTTTAC GAGGATCTCA CGCCCGCCGC GCCCGCCGGC
AAGCCCACGC TTTACGAGCA GGCGACGCGA GACCGCGGAG CAGGGCGGCC GACGAAGCGG
GAGCGTCGCG AAACCGACCG GCTGCGGCCG GGCGCGGACC ACGAGGACGA TTGA
 
Protein sequence
MEKQPPSAPA TRQRLDKWLF FARLIKSRSL AQKAIEAGHV VVNGKRETQS SAQIKAGDML 
EVSLERRDLV LRVLLPGSRR GPYEEARLLY EDLTPAAPAG KPTLYEQATR DRGAGRPTKR
ERRETDRLRP GADHEDD