Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3114 |
Symbol | |
ID | 5323993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3261454 |
End bp | 3261867 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640792064 |
Product | RNA-binding S4 domain-containing protein |
Protein accession | YP_001328775 |
Protein GI | 150398308 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00552893 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAAAC AGCCGCCGTC CGCCCCTGCA ACGCGTCAGC GGCTCGACAA ATGGCTGTTC TTTGCCCGGC TGATCAAATC GCGCTCGCTC GCTCAGAAGG CGATCGAGGC CGGTCACGTG GTGGTCAACG GCAAACGTGA AACGCAATCG TCCGCCCAGA TAAAGGCCGG AGACATGCTC GAAGTGTCGC TGGAGCGGCG CGATCTGGTC TTGCGGGTGC TGCTGCCTGG GTCCCGCCGA GGGCCCTACG AGGAAGCCCG TCTGCTTTAC GAGGATCTCA CGCCCGCCGC GCCCGCCGGC AAGCCCACGC TTTACGAGCA GGCGACGCGA GACCGCGGAG CAGGGCGGCC GACGAAGCGG GAGCGTCGCG AAACCGACCG GCTGCGGCCG GGCGCGGACC ACGAGGACGA TTGA
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Protein sequence | MEKQPPSAPA TRQRLDKWLF FARLIKSRSL AQKAIEAGHV VVNGKRETQS SAQIKAGDML EVSLERRDLV LRVLLPGSRR GPYEEARLLY EDLTPAAPAG KPTLYEQATR DRGAGRPTKR ERRETDRLRP GADHEDD
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