Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3100 |
Symbol | |
ID | 5323979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3245790 |
End bp | 3246536 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640792050 |
Product | hypothetical protein |
Protein accession | YP_001328761 |
Protein GI | 150398294 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.261022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.759008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTAT TCCAGATCTT CTTGCTCTTC GTTGCAGGGT TCCTGTCCGG CGTGGTCAAC GCTATTGCCG GCGGCGGCAC CTTCCTGACT TTCGGCGCCA TGACGCTTGC AGGCCTGCCG CCTATCGTTG CCAACGCCAC TTCCTCCATC ATTCAGTTCC CCGGCTACAT CACCTCGGCG CTTGCCTATG CCAAGGAAAT CCGGGCCGAC CGGAAGAACG CGCTCGTCCT CGCCGTCATC TCGGCGGTCG GAGGTCTTGC CGGCGCGCTG CTTCTCCTGT CGCTCTCCAA TCCGGCTTTT CGTCAGATGG TGCCCTGGCT GCTGATCGCC GCGACAGCGA TCTTCGCGGC CGGTCCGCTG CTGAAGCCGA AGGCGCGCAG CGACGAGCAC CGCATCGGGC CGCTCGGTGT GGCGAGCCAG TTGGTCACCT CCGTCTATGG CGGCTTCTTC GGCGCCGGCA TGGGGATCAT GATGCTTGCC GTTCTCGGGC TTGCGACCGG CGGCGGCTAC CACCGGCTGA ACGCGCTCAA GAACTTCATC TCCATCATCA TCGCCGCGAT CGCGATCGTG GTTTTCACCG CGGGCGGGGT CGTCTCCTGG CTGCATGCGG CGATCATGGT GCCGGGCGCA GCCCTCGGCG GCTATATGGG CGTATGGGCG GCACGCCGCG TTCCGCAGTC GGTGATACGC GCCGTGGTCG TGGCAGTGGG GCTCCTGCTG GCCGCCTATT ACTTCTTCAC GGGTTGA
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Protein sequence | MTLFQIFLLF VAGFLSGVVN AIAGGGTFLT FGAMTLAGLP PIVANATSSI IQFPGYITSA LAYAKEIRAD RKNALVLAVI SAVGGLAGAL LLLSLSNPAF RQMVPWLLIA ATAIFAAGPL LKPKARSDEH RIGPLGVASQ LVTSVYGGFF GAGMGIMMLA VLGLATGGGY HRLNALKNFI SIIIAAIAIV VFTAGGVVSW LHAAIMVPGA ALGGYMGVWA ARRVPQSVIR AVVVAVGLLL AAYYFFTG
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