Gene Smed_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3090 
Symbol 
ID5323969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3236157 
End bp3236789 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content61% 
IMG OID640792040 
Productintracellular septation protein A 
Protein accessionYP_001328751 
Protein GI150398284 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2917] Intracellular septation protein A 
TIGRFAM ID[TIGR00997] intracellular septation protein A 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.779828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCG TCGAGGCAGC CAAGCCGAAA ACAGAGGTAA GCCCGCTCCT CAAGCTCGTG 
CTCGAGCTCG GGCCTCTGAT GGTCTTCTTC TTTGCCAATT CGCGGGGCGA ATGGCTGGCG
AGCCGCTTTC CCGTGCTCGC GGATCTCGGC GGGCCGATCT TCATCGCCAC CGGCCTCTTC
ATGGCGGCGA CGGCTGCGGC TCTCGCCGTT TCCTGGATGA TGACGCGCAC GCTGCCGATG
ATGCCGCTCA TCTCCGGCAT CGTCGTCTTC GTCTTCGGTG CGCTGACGCT CTGGCTGCAG
AACGACACTT TCATCAAGAT GAAGCCGACC ATCGTCAATA CGCTCTTCGG CGCGATCCTG
CTCGGCGGGC TCCTGTTCGG CAAATCGCTG CTCGGCTACG TTTTCCACGC CGCCTTCAAG
CTGGACGAAG AGGGCTGGCG GAAGCTTACG GTGCGCTGGG GTGTGTTCTT CCTGTTCCTC
GCGGTGCTGA ACGAGGTTAT CTGGCGCTCC TTCTCGACCG ATTTCTGGGT CGCCTTCAAG
GTCTGGGGCA CCATGCCGAT CACCATTCTT TTCACGCTCG CGCAGATGCC GCTGATCATG
AAGCATTCGG TCGATCAGGA AAACGCGAAG TGA
 
Protein sequence
MSTVEAAKPK TEVSPLLKLV LELGPLMVFF FANSRGEWLA SRFPVLADLG GPIFIATGLF 
MAATAAALAV SWMMTRTLPM MPLISGIVVF VFGALTLWLQ NDTFIKMKPT IVNTLFGAIL
LGGLLFGKSL LGYVFHAAFK LDEEGWRKLT VRWGVFFLFL AVLNEVIWRS FSTDFWVAFK
VWGTMPITIL FTLAQMPLIM KHSVDQENAK