| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3084 |
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| Symbol | |
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| ID | 5323963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3232691 |
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| End bp | 3233314 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792034 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_001328745 |
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| Protein GI | 150398278 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.99362 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCTGC TGGCTGAAGG ATTGAGTGCG AGGCGCGGCG AGGACCTGAT TTTCAAGGAT
ATTTCGTTTG ATCTGGCTGG CGGCGAGGCG CTCGTGGTGA CCGGTCCGAA CGGTTCCGGC
AAGTCGACGC TTCTGCGCGT GCTGGCAGGC CTTCTCGGAG CGGATTCGGG CCGCGTCCGG
CTGAAGGGCG GGCCCGCCGG TTTCGATCAC CCGCGCGAAC TCAGCCATTA TCTCGGCCAC
CGGAACGCAA TGAAGCGTGA GCTGACGGTC GAGGAAAATC TCATCTTCTG GCAGCGCTTT
CTCGGCGATT CACCCGGCGG CTCCGGAGAC GGCCTCGTTG AAGCCGCCAC GGCCGTGGGA
CTAGCCGACA TCATCCACCT GCCCTTCGGC TACCTTTCCG CCGGCCAGCA GCGCCGCATG
GCAATGGCGA AACTGCTCGT GGCCTATCGG CCGATCTGGC TCCTCGACGA GCCGACGGCG
GCTCTCGACG TCAGCGCCGA CAGGCTCTTT GCCGGGCTGG TGGCGCGCCA TCTCGAACGC
GGCGGGATCG TCATCGCCGC CACGCACCAG GCTCTGGGGT TCACCGGGGT TAAAAGCCTC
GAAATGACGG GGTTCTTCCA TTGA
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| Protein sequence | MRLLAEGLSA RRGEDLIFKD ISFDLAGGEA LVVTGPNGSG KSTLLRVLAG LLGADSGRVR
LKGGPAGFDH PRELSHYLGH RNAMKRELTV EENLIFWQRF LGDSPGGSGD GLVEAATAVG
LADIIHLPFG YLSAGQQRRM AMAKLLVAYR PIWLLDEPTA ALDVSADRLF AGLVARHLER
GGIVIAATHQ ALGFTGVKSL EMTGFFH
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