| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3009 |
|---|
| Symbol | obgE |
|---|
| ID | 5323887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | + |
|---|
| Start bp | 3157393 |
|---|
| End bp | 3158403 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640791959 |
|---|
| Product | GTPase ObgE |
|---|
| Protein accession | YP_001328671 |
|---|
| Protein GI | 150398204 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0536] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCC TCGACGAAAC GAAAGTCTAT ATCCGGTCCG GAGACGGCGG CGCGGGCGCC
GTGTCCTTCC GCCGCGAGAA GTTCATCGAG TTCGGTGGCC CGGATGGCGG CGACGGCGGC
CGTGGCGGCG ATGTCTGGGT GGAGGCCGTC AATGGCCTCA ATACCCTCAT CGACTTCCGG
TATCAGCAGC ATTTCAAGGC CAAGACCGGC ACGCACGGCA TGGGCCGCAA CCGCACCGGC
GCCAAAGGCG CCGACGTGAC CCTGAAAGTG CCGGTCGGCA CGCAGATCTT CGAGGAGGAC
AGCGAAACGC TGATCGTCGA CATGGTGGCG GAAGGGCAGC GCTACCGGCT TGCCGCCGGC
GGCAATGGCG GCTTCGGAAA CGCGCATTTC AAGTCCTCGA CCAACCAGGC ACCCAATTGG
GCCAATCCCG GGCTCGAGGG CGAGGAGAAA ACCATCTGGC TGCGGCTGAA GCTGATTGCC
GATGCCGGCC TCGTCGGTCT GCCCAATGCC GGCAAATCGA CTTTTCTCGC CGCCTGCACC
CGCGCCCGGC CGAAAATCGC CAACTATCCT TTCACGACGC TGCACCCCAA TCTCGGCGTC
GCGACCGTCG ACGAGAAGGA ATTCATCATC GCCGACATTC CCGGGCTGAT CGAAGGGGCG
CATGAGGGCG TGGGTATCGG CGACCGCTTT CTCGGCCATG TCGAGCGCAC CCGCGTGCTG
CTGCACCTCG TCTCCGCGCA GGAGGAGGAT GTCGCCAAGG CCTACAAGAC GGTGAAGCAC
GAGCTCGAGG CCTATGGCGG GGGGCTCGAG GAAAAGCCGC AGATCGTGGC TCTGTCGCAG
ATCGACGTGC TCGACGAAGC CGAGTTGAAG GCGAAGAGCA AGGCGCTCGG CAAAGCCTGC
GGCACGCCGC CGCTGCTTAT CTCCGCCGTC ACCAACAAGG GCATGACGGA AACACTGAGA
GCATTGCGCA GCGTCATCGA CGCGGCCAAG GCGGGCGAGG AGGACGCCTG A
|
|---|
| Protein sequence | MKFLDETKVY IRSGDGGAGA VSFRREKFIE FGGPDGGDGG RGGDVWVEAV NGLNTLIDFR
YQQHFKAKTG THGMGRNRTG AKGADVTLKV PVGTQIFEED SETLIVDMVA EGQRYRLAAG
GNGGFGNAHF KSSTNQAPNW ANPGLEGEEK TIWLRLKLIA DAGLVGLPNA GKSTFLAACT
RARPKIANYP FTTLHPNLGV ATVDEKEFII ADIPGLIEGA HEGVGIGDRF LGHVERTRVL
LHLVSAQEED VAKAYKTVKH ELEAYGGGLE EKPQIVALSQ IDVLDEAELK AKSKALGKAC
GTPPLLISAV TNKGMTETLR ALRSVIDAAK AGEEDA
|
|---|
| |