Gene Smed_3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3008 
Symbol 
ID5323886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3156673 
End bp3157275 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content67% 
IMG OID640791958 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001328670 
Protein GI150398203 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC TGGTCACAGC GCGGCCGGCA ACGGTCGCCC GCCCCGGCCC CGGCCCGGCA 
CCGGTCATCG AAACGGCGCG GCTGCGGCTC CGTCCGCACC GGCTTTCCGA TGCGGCGGCA
ATCGCCGACT CGCTCAACGA CTTCCAGGTA GCGCGGATGC TCTCTCGGGT GCCCGCGCCC
TACGATCAGC AGGACGCGTT CGACTGGCTG AACCGGCAGA CGGCCAACAT GCTGACGGCC
GATGTCATGC CGGATTGGAC GCTCGCCATC ACCACCCAGG GTGACGACGT CCATATCGGC
TGCATCGGCA TCGAGCTCAG AAACGGCCAA TGGCATGTCG GCTACTGGCT GAACCGGTTC
TATTGGGGCA AGGGGCTCAT GAGCGAGGCG GTTCATGCCG CGATCGAACG GTTCTTCCGC
CGCATGCCGG AAACGGTGCT GCATTCGGGC GTCTTCGCCG ACAACCCGGC TTCGCTCAGG
GTGCAGGAAA AGCTCGGCTT CCGGGTCACC GGCTGCAGCC AGATCTACGC GCTCGCGCGC
AATGCGATGA TGGCGCACAT CGAGACCCGG CTTGCGGCTG AGGACCTGCG CCGGCCGGGC
TGA
 
Protein sequence
MNALVTARPA TVARPGPGPA PVIETARLRL RPHRLSDAAA IADSLNDFQV ARMLSRVPAP 
YDQQDAFDWL NRQTANMLTA DVMPDWTLAI TTQGDDVHIG CIGIELRNGQ WHVGYWLNRF
YWGKGLMSEA VHAAIERFFR RMPETVLHSG VFADNPASLR VQEKLGFRVT GCSQIYALAR
NAMMAHIETR LAAEDLRRPG