Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3008 |
Symbol | |
ID | 5323886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3156673 |
End bp | 3157275 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640791958 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001328670 |
Protein GI | 150398203 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCAC TGGTCACAGC GCGGCCGGCA ACGGTCGCCC GCCCCGGCCC CGGCCCGGCA CCGGTCATCG AAACGGCGCG GCTGCGGCTC CGTCCGCACC GGCTTTCCGA TGCGGCGGCA ATCGCCGACT CGCTCAACGA CTTCCAGGTA GCGCGGATGC TCTCTCGGGT GCCCGCGCCC TACGATCAGC AGGACGCGTT CGACTGGCTG AACCGGCAGA CGGCCAACAT GCTGACGGCC GATGTCATGC CGGATTGGAC GCTCGCCATC ACCACCCAGG GTGACGACGT CCATATCGGC TGCATCGGCA TCGAGCTCAG AAACGGCCAA TGGCATGTCG GCTACTGGCT GAACCGGTTC TATTGGGGCA AGGGGCTCAT GAGCGAGGCG GTTCATGCCG CGATCGAACG GTTCTTCCGC CGCATGCCGG AAACGGTGCT GCATTCGGGC GTCTTCGCCG ACAACCCGGC TTCGCTCAGG GTGCAGGAAA AGCTCGGCTT CCGGGTCACC GGCTGCAGCC AGATCTACGC GCTCGCGCGC AATGCGATGA TGGCGCACAT CGAGACCCGG CTTGCGGCTG AGGACCTGCG CCGGCCGGGC TGA
|
Protein sequence | MNALVTARPA TVARPGPGPA PVIETARLRL RPHRLSDAAA IADSLNDFQV ARMLSRVPAP YDQQDAFDWL NRQTANMLTA DVMPDWTLAI TTQGDDVHIG CIGIELRNGQ WHVGYWLNRF YWGKGLMSEA VHAAIERFFR RMPETVLHSG VFADNPASLR VQEKLGFRVT GCSQIYALAR NAMMAHIETR LAAEDLRRPG
|
| |