Gene Smed_3007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_3007 
Symbol 
ID5323885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3156011 
End bp3156676 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID640791957 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001328669 
Protein GI150398202 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.43356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGAG GAAGAACCAT GCAAACCGAG CTCGCCAGGG AAGACCAATC ACGGTCTCCC 
GAACAGAGGC TGAGGCCTCA GCGGTCAAGG ACCGATTGCC CGATATTGTT ATCGCCCAGG
CTCGTTATGC GCGCGCCCCA TGAAGACGAT ATCGACGCCC TTGCCCATCT TGCCAACAAT
GCCAACATTG CCACCATGGT CTCGCGCATG CCGCATCCCT ACACCACGGC GGATGCGGCC
GACTTCGTGC GACGCGCGAA AGCCGGCACG AACGGCCCCG GCACGATTGG CAAGTGCGTC
TACGCGATCA CGAAAGCGGA CAATGGCGCA TTTCTCGGTT GCTGCGGGGT GGAGCCGCAT
GCCGACGGCA AGACGGTCGA ACTCGGCTAC TGGCTGGGCG AGCCTTACTG GAATCAGGGC
TATGCCACCG AGGCGGCACA GGCTTTGACC GACATGGCCT TCCGTACCCG CGACATCGAC
CAGATCGATG CGCGCTGCCG GGTCATGAAC ATCCCTTCCC GCCGGGTCAT CCAGAAGTGC
GGCTTTCAGT TCCAGGGTTC GGGCATGGTC GGGAGCCTGG CGCTTGGCGG CATGGTCCCC
GTCGAATGGT ACCGGCTCGA CCGGAAGACC TGGGTCTCGT TGAGAAGCTG GGGAGGTGCC
CGATGA
 
Protein sequence
MSGGRTMQTE LAREDQSRSP EQRLRPQRSR TDCPILLSPR LVMRAPHEDD IDALAHLANN 
ANIATMVSRM PHPYTTADAA DFVRRAKAGT NGPGTIGKCV YAITKADNGA FLGCCGVEPH
ADGKTVELGY WLGEPYWNQG YATEAAQALT DMAFRTRDID QIDARCRVMN IPSRRVIQKC
GFQFQGSGMV GSLALGGMVP VEWYRLDRKT WVSLRSWGGA R