Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_3007 |
Symbol | |
ID | 5323885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3156011 |
End bp | 3156676 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791957 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001328669 |
Protein GI | 150398202 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.43356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGAG GAAGAACCAT GCAAACCGAG CTCGCCAGGG AAGACCAATC ACGGTCTCCC GAACAGAGGC TGAGGCCTCA GCGGTCAAGG ACCGATTGCC CGATATTGTT ATCGCCCAGG CTCGTTATGC GCGCGCCCCA TGAAGACGAT ATCGACGCCC TTGCCCATCT TGCCAACAAT GCCAACATTG CCACCATGGT CTCGCGCATG CCGCATCCCT ACACCACGGC GGATGCGGCC GACTTCGTGC GACGCGCGAA AGCCGGCACG AACGGCCCCG GCACGATTGG CAAGTGCGTC TACGCGATCA CGAAAGCGGA CAATGGCGCA TTTCTCGGTT GCTGCGGGGT GGAGCCGCAT GCCGACGGCA AGACGGTCGA ACTCGGCTAC TGGCTGGGCG AGCCTTACTG GAATCAGGGC TATGCCACCG AGGCGGCACA GGCTTTGACC GACATGGCCT TCCGTACCCG CGACATCGAC CAGATCGATG CGCGCTGCCG GGTCATGAAC ATCCCTTCCC GCCGGGTCAT CCAGAAGTGC GGCTTTCAGT TCCAGGGTTC GGGCATGGTC GGGAGCCTGG CGCTTGGCGG CATGGTCCCC GTCGAATGGT ACCGGCTCGA CCGGAAGACC TGGGTCTCGT TGAGAAGCTG GGGAGGTGCC CGATGA
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Protein sequence | MSGGRTMQTE LAREDQSRSP EQRLRPQRSR TDCPILLSPR LVMRAPHEDD IDALAHLANN ANIATMVSRM PHPYTTADAA DFVRRAKAGT NGPGTIGKCV YAITKADNGA FLGCCGVEPH ADGKTVELGY WLGEPYWNQG YATEAAQALT DMAFRTRDID QIDARCRVMN IPSRRVIQKC GFQFQGSGMV GSLALGGMVP VEWYRLDRKT WVSLRSWGGA R
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