| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2982 |
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| Symbol | |
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| ID | 5323859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3129485 |
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| End bp | 3130762 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640791933 |
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| Product | cysteine desulfurase family protein |
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| Protein accession | YP_001328646 |
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| Protein GI | 150398179 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.234076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCA ACGCACAGCT AGATATCGAT TTCGCGCGCA GTCAGTTCCC GGGCCTCGAA
CTCGGCTGGA CCTTTTTCGA CAATGCCGGC GGATCGCAGA TCCTCAAGGG CGCGCTCGAG
CGCATAAACA CCTTCCTTAT CGAGAAGAAC GTTCAGATCG GCGGTTCCTA TGCGGTGTCG
CAGCATGCGG CCAAGGCGCT CTACGAGGCC CGCACAGCCG GGATGCATCT CGTTAATGCG
AGCCGGCCGG AAGAAATCGT CTTCGGCAGT TCGACGACGG CGCTTCTCCA GAACCTGGCT
CGCGCCATGG CGAGCCAGCT TGCGCCGGGC GACGAAATCA TCGTCACGGT GAGCGACCAC
GAATCCAATA TCGGTCCTTG GGACCGGTTG CAGGCAGCGG GCATCGTTCT CAAGATCTGG
CCGCTCGACA AAAAGACCCT GACCCTTGAC CTCGCCGACC TCGAACCTTT GATGGGCGCA
CGCACGAAGC TCGTCTGCGT GCCCCATGCT TCCAACATTC TCGGCTCGAT CAACCCGGTC
CGCGAAATTG CCGATTTCGT CCACGCCCGA AACGCGAAAC TATGCGTCGA CGCGGTGGCT
TACGCGCCGC ACCGCGCCAT CGACGTACAG GCCTTCGACG CCGACTATTA TGTCTTCAGT
CTCTACAAGA CCTATGGGCC GCACTATGCG CTGATGTACG GCAAATATGA TCTGCTGCTC
GAGCTGGATA CGCTCTACCA CTACTTCTAC GGCAAGGATA AGGTTCCAGG AAAGCTCGAG
CCAGGCAATC CGAACTATGA GCTCGCCTAT TCGACCTGCG GGATCGTCGA CTACCTTTGC
GAGCTCGGCG CCCGCTCCGG AGAAGCCGGC ACTGTCAGGC GAAAGATCGA GGCCGCCTTC
GATGCGGTGG CCAGCCAGGA GGACGCCCTG ACCGAGCGGC TCCTCTCCTA TCTGCGCTCG
CGCAACGACT GCCGGATCAT CGGACAATCG GTCAATCGCG ACAGCCAGCG CGTGCCCACC
ATTTCCTTCC GCTTCGACGG ACGCGATGCT GCAGAACTCT GCAAGGCGAT CGACGAGGAG
AACATTGCCA TTCGCCACGG CGATTTCCAT TCCCGCCGGC TTGCCGAGTA TCTGGAGCTG
ACCGATTACA ACGGCATGCT GCGCGTCTCC ATGGTGCATT ACAACACGAT CGAGGAAGTG
GATCGTCTCA CGGCCGCCTT CGACCGGGTT CTTTCGACCG GCACCGGAAA CACAGCCGAT
GCAAGGCGCG CCGGATGA
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| Protein sequence | MAANAQLDID FARSQFPGLE LGWTFFDNAG GSQILKGALE RINTFLIEKN VQIGGSYAVS
QHAAKALYEA RTAGMHLVNA SRPEEIVFGS STTALLQNLA RAMASQLAPG DEIIVTVSDH
ESNIGPWDRL QAAGIVLKIW PLDKKTLTLD LADLEPLMGA RTKLVCVPHA SNILGSINPV
REIADFVHAR NAKLCVDAVA YAPHRAIDVQ AFDADYYVFS LYKTYGPHYA LMYGKYDLLL
ELDTLYHYFY GKDKVPGKLE PGNPNYELAY STCGIVDYLC ELGARSGEAG TVRRKIEAAF
DAVASQEDAL TERLLSYLRS RNDCRIIGQS VNRDSQRVPT ISFRFDGRDA AELCKAIDEE
NIAIRHGDFH SRRLAEYLEL TDYNGMLRVS MVHYNTIEEV DRLTAAFDRV LSTGTGNTAD
ARRAG
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