Gene Smed_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2970 
Symbol 
ID5323847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3117555 
End bp3118034 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID640791921 
Producthypothetical protein 
Protein accessionYP_001328634 
Protein GI150398167 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC GTTTTCGCGC ATTTCTGGAA GGCATGACGG GCTCGGCTCA GATTGAAGCG 
GGCGATCCAA GGGTGGCCGT GATCGGTCTC TGCTTCCAGG TCATGGAAGC GGATGGTGCG
GTCCGCAGTT CTGAGCGCCG CAAGATGCGC GCGCTCATCA AGGATCACTA CAGGCTCGAC
GATGCCGTGC TCAATGCATT GATCGAGGCC GGCGAGAACG CCGAAAGCGA GGCGATCGAC
TTTTATCGGT TCACCTCCGA CATAAAGCGG CACCTGTCCG AAGAGCAGCG TATCGAGCTC
GTCGGAATGC TGTGGGAGAT CGTTTACGCG GACGGCTCGC GCAGCGAAAT GGAAGACCAT
GCGATCTGGC GGATTGCCGA CCTCCTCGGC GTCTCCGGTC GTGACCGGGT CTTGAAACGG
CAAGAAGCAG CAGCCAAGAT CGACATGGTG GAGGAGAACG AGGCGCAACA GGGAAGTTGA
 
Protein sequence
MFERFRAFLE GMTGSAQIEA GDPRVAVIGL CFQVMEADGA VRSSERRKMR ALIKDHYRLD 
DAVLNALIEA GENAESEAID FYRFTSDIKR HLSEEQRIEL VGMLWEIVYA DGSRSEMEDH
AIWRIADLLG VSGRDRVLKR QEAAAKIDMV EENEAQQGS