Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2967 |
Symbol | |
ID | 5323844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3113520 |
End bp | 3114236 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640791918 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_001328631 |
Protein GI | 150398164 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGTGC TCGTGACCCG GCCACGCCCG TCAGCCGAAA GCACGGCGGC AAAGCTCGGT GCCATGGGCC ATGAGACGGC CATACTGCCG ATGTTGCAGG CGCAGCATCT CGCCGATGCG GTTCTCACGG CATTGAGTGT ACCGCATCAG GCGATTGCCA TCACCAGCGC GGAGGCCGTC CGCGTCCTCG GCTCGCTCGG GCCTGCGCTT GAGCCACATT TCGGCACGCC GCTCTTCTCG GTCGGAGGCG CGACCGCGCG CGCGGCGGGT GGCCTCGGAT TTACCGATAT CCGCACGGGG CCGGGAACCG GAGAGGGGCT CGCCGAGACG GTGGCTGCCC ACCTCCCCGC TGGCGGAGCC CTGGTCTATC TCGCCGGCTC GCCGCGGACC GGGGGCTTCG AACGGTCCTT GCACGAAAGG CGGGTCGATT ACAGGACCGC CGAATGCTAT CGAATGGCGC CGGTCCACTA TTCTGCGGAC ACGCTGCCTG AACTCGTCCG CGCTGGTCCT TTTGATGCGG TGCTGCTCTA CTCCCGCGAG ACCGCGCGGC GCTTGATCGC AACATTGCGG GAGAGCCGCC TTCAGCCCGC GGAACTGGCT TCGCGTTGCC TCTGCCTGAG CTGGCCGATC AGAGAGATCC TGCCGGCCGG CTTTGTCAGC GAGGTTGCAG CGGCGCCCGA CGAAGAAAAT CTGTTCAGGC TCCTCGAAGC CGAATAG
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Protein sequence | MRVLVTRPRP SAESTAAKLG AMGHETAILP MLQAQHLADA VLTALSVPHQ AIAITSAEAV RVLGSLGPAL EPHFGTPLFS VGGATARAAG GLGFTDIRTG PGTGEGLAET VAAHLPAGGA LVYLAGSPRT GGFERSLHER RVDYRTAECY RMAPVHYSAD TLPELVRAGP FDAVLLYSRE TARRLIATLR ESRLQPAELA SRCLCLSWPI REILPAGFVS EVAAAPDEEN LFRLLEAE
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