Gene Smed_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2967 
Symbol 
ID5323844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3113520 
End bp3114236 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content67% 
IMG OID640791918 
Producturoporphyrinogen-III synthase 
Protein accessionYP_001328631 
Protein GI150398164 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGC TCGTGACCCG GCCACGCCCG TCAGCCGAAA GCACGGCGGC AAAGCTCGGT 
GCCATGGGCC ATGAGACGGC CATACTGCCG ATGTTGCAGG CGCAGCATCT CGCCGATGCG
GTTCTCACGG CATTGAGTGT ACCGCATCAG GCGATTGCCA TCACCAGCGC GGAGGCCGTC
CGCGTCCTCG GCTCGCTCGG GCCTGCGCTT GAGCCACATT TCGGCACGCC GCTCTTCTCG
GTCGGAGGCG CGACCGCGCG CGCGGCGGGT GGCCTCGGAT TTACCGATAT CCGCACGGGG
CCGGGAACCG GAGAGGGGCT CGCCGAGACG GTGGCTGCCC ACCTCCCCGC TGGCGGAGCC
CTGGTCTATC TCGCCGGCTC GCCGCGGACC GGGGGCTTCG AACGGTCCTT GCACGAAAGG
CGGGTCGATT ACAGGACCGC CGAATGCTAT CGAATGGCGC CGGTCCACTA TTCTGCGGAC
ACGCTGCCTG AACTCGTCCG CGCTGGTCCT TTTGATGCGG TGCTGCTCTA CTCCCGCGAG
ACCGCGCGGC GCTTGATCGC AACATTGCGG GAGAGCCGCC TTCAGCCCGC GGAACTGGCT
TCGCGTTGCC TCTGCCTGAG CTGGCCGATC AGAGAGATCC TGCCGGCCGG CTTTGTCAGC
GAGGTTGCAG CGGCGCCCGA CGAAGAAAAT CTGTTCAGGC TCCTCGAAGC CGAATAG
 
Protein sequence
MRVLVTRPRP SAESTAAKLG AMGHETAILP MLQAQHLADA VLTALSVPHQ AIAITSAEAV 
RVLGSLGPAL EPHFGTPLFS VGGATARAAG GLGFTDIRTG PGTGEGLAET VAAHLPAGGA
LVYLAGSPRT GGFERSLHER RVDYRTAECY RMAPVHYSAD TLPELVRAGP FDAVLLYSRE
TARRLIATLR ESRLQPAELA SRCLCLSWPI REILPAGFVS EVAAAPDEEN LFRLLEAE