| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2966 |
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| Symbol | hemC |
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| ID | 5323843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3112412 |
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| End bp | 3113404 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791917 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001328630 |
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| Protein GI | 150398163 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTTCGT CCTTAAATCG ATTCCGATTT AAGCAACCAC GCAGTAACAA CGGATGGCAG
AGGATGCAAA CAAAACCTTT CCGCATAGGC ACCCGCGGCA GTCCGCTGGC GCTGGCCCAG
ACGCATGAAA CGCGCGATCG TCTCGCCGCC GCTCATGGTC TGCCCGTGGA GATGTTCGAG
ATCGTCACAC TCTCCACCAA GGGCGACCGG ATCACCGACC GGTCCCTTGC AGAGATCGGC
GGCAAGGGTC TGTTCACCGA AGAGCTCGAA CAGCAGCTTC TGTCGGGAGA CCTCGATTTT
GCCGTGCATT CGTCGAAGGA CATGACGACG AAGCTGCCCG ACGGTCTGTT TCTTTCTGCT
TTTCTGCCGC GCGAGGACGT CCGCGACGCC TTTGTCGGCC GTTCCGCCAC AAGGCTTGCC
GAGCTCCCGC AAGGGGCCAC CGTGGGGTCG TCGTCCCTGC GGCGTCAGGC GCTGATCCGG
CGGTTGCGAC CGGACGTCAA CGTGATCACC TATCGTGGTC AGGTCGAGAC GCGCCTGCGC
AAGCTCGCCG AGGGGCAGGT CGACGGCACG CTTCTGGCCT ATGCCGGCCT GAGGCGGCTG
GGCATGGCCC ATGTTCCAAC GGAGCTGCTC GACCCCGAGT CGTTCCCGCC GGCGCCCGCC
CAAGGTGCGA TCTGTATCGA AGCGCGCCTC GGCGACGACC GCATCAACGC GCTGCTTTCT
GCTGTCGACG ACCCCCGCAC CCATGAGGCA GTCTCCTGCG AGCGTGGCTT CCTGGCGACG
CTCGACGGCT CCTGCCGCAC GCCGATAGCC GGTTACGCGC AGTCGGATGG GGCGCGTATC
CGCTTTTCCG GCATGATCCT GACGCCGGAC GGCACGACCT GCCATCGCAT CGAAACCGAT
GGCAGAACGG CGGACGCGGC GGCGCTCGGG CGGGAAGCGG GCGAGCGGAT CCGCGCCAAG
GCCGGACCGG AATTCTTCTT GAGCTGGAGC TAG
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| Protein sequence | MVSSLNRFRF KQPRSNNGWQ RMQTKPFRIG TRGSPLALAQ THETRDRLAA AHGLPVEMFE
IVTLSTKGDR ITDRSLAEIG GKGLFTEELE QQLLSGDLDF AVHSSKDMTT KLPDGLFLSA
FLPREDVRDA FVGRSATRLA ELPQGATVGS SSLRRQALIR RLRPDVNVIT YRGQVETRLR
KLAEGQVDGT LLAYAGLRRL GMAHVPTELL DPESFPPAPA QGAICIEARL GDDRINALLS
AVDDPRTHEA VSCERGFLAT LDGSCRTPIA GYAQSDGARI RFSGMILTPD GTTCHRIETD
GRTADAAALG REAGERIRAK AGPEFFLSWS
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