| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2933 |
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| Symbol | xerC |
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| ID | 5323810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 3079559 |
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| End bp | 3080500 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640791884 |
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| Product | site-specific tyrosine recombinase XerC |
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| Protein accession | YP_001328597 |
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| Protein GI | 150398130 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.83049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATGA ACGAACTCCT TATCATAGGC CATCCGGAAG TGATGGCGGA ACGGAAGCGC
TGGCTCGCGA GCCTTGCCGA GGAGCGCCGG CTTTCAGGAA AGACGGTCGA GGCCTATGAG
CGCGACACGC GCCAATTTCT GACCTTCCTC ACCGGTCACC TGGCTGGGCC GCCGAGGCTC
TCGGACATTC GCGCCCTGCG CCCCGCGGAT TTGCGCGGCT TTCTGGCACA GCGCCGCAAA
GGCGGCGCTG GCGCGCGCAC CCTCGGCCGT GGCTTGGCGG GTCTGCGTTC CTTCCTGCGC
TATCTCGAGA AAAACGGATT GGCCAATGCG GCCGGCGCGG GGGCGGTGCG TTCACCGAAG
CAGCCAAAGT CGCTCCCCAA GCCTCTGACC GACCGCGATG CGCTGAAAGT CGTAACCACC
GACTCGCAAT TGGCGGAGGA GCCGTGGATC GCCGCTCGCA ATGCCGCGGT TCTGACCCTG
CTTTATGGCT GCGGCCTGCG CATAGCGGAG GCACTGGACC TGACGCCCGC CGACTTCACC
GAAACGGCCA GGTCCTTGCG GGTCACCGGA AAGGGCGGCA AGACACGGAT CGTGCCTCTG
ATCGCAGCCG CCGCGGAAGC GGTGACGACC TACCGGAAGC TTTGTCCTTA CCACATCGAG
GCTGGAGAAC CGATTTTTCG CGGCGCCCGC GGCGCGAAAC TTCAGCCGGC GATCATACAG
CGCGAAATGC AGAAGCTGCG CTCCGCACTC GGCCTGCCGG ATTCGGCGAC GCCGCACGCG
CTTCGCCACT CTTTCGCGAC CCATCTTCTT GCGGGCGGCG GGGATCTGCG CACGATACAG
GAGCTGCTGG GCCATGCCAG CCTTTCGACG ACGCAGGTCT ATACCGGAGT CGATTCGGCG
CGGCTCCTGG AGATCTACGA CCGCGCTCAT CCGCGCGCCT AA
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| Protein sequence | MLMNELLIIG HPEVMAERKR WLASLAEERR LSGKTVEAYE RDTRQFLTFL TGHLAGPPRL
SDIRALRPAD LRGFLAQRRK GGAGARTLGR GLAGLRSFLR YLEKNGLANA AGAGAVRSPK
QPKSLPKPLT DRDALKVVTT DSQLAEEPWI AARNAAVLTL LYGCGLRIAE ALDLTPADFT
ETARSLRVTG KGGKTRIVPL IAAAAEAVTT YRKLCPYHIE AGEPIFRGAR GAKLQPAIIQ
REMQKLRSAL GLPDSATPHA LRHSFATHLL AGGGDLRTIQ ELLGHASLST TQVYTGVDSA
RLLEIYDRAH PRA
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