Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2932 |
Symbol | |
ID | 5323809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 3078445 |
End bp | 3079359 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791883 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_001328596 |
Protein GI | 150398129 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.572672 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGAC GTGATTCGGC GAGCGCTCTG GCGCATTTTG CAGAGGCGGT TGCGCTGGTC TCGCAAGGGC GTCCGGGCCA TATTGTCGAT ACGCTGATCG CGGAGCGCGG ACAGAAGATC GTTCGGCACC CACTTTGGCC CGTCATGCGG CCCCTTCTCT ACACGCTTCT CAACTACCGC AAGGCGATAG AATTCGCCAA TGCCGTTGCC AATATGCCTG GTTTCCAGGC CTTCGAACAT CTGAGCTCGC TTCTTGCTCT CGAGATCCGC GCCGACAGGC CGGAGCGTAT TCCCGAGAAG GGCGGCTTCC TGCTCGTCAG CAATCATCCG ACGGGCATTG CCGACGGCAT CGCCGTGTTC GATCTCCTGA AGAGCCGGCG GCCGGACATG ATGTTCTTCG CGAATCGCGA CGCGATCCGC GTCAATCCGC GCTTCGTGGA AATGGTCATC CCGGTCGAAT GGCGGGAGGA GCACAAGTCT AAGCTCAAGG CGCGCGAGAC GCTTCAGGTC ACCAATCGGG CCATTGAGGA GGGCAAGGCA ACCGTGCTCT TCCCTTCCGG CCGCATAGCA TACTGGGCCG AGGGACGACT GAACGAGCGC CCGTGGAAAA GCTCCGCGGT CGGCTTCGCA CGCAAATACG GCCTGCCGAT CCTGCCGGTG CATATGAGCG CGCGCAATTC CGGCCTCTTC TACTGGTTTG CGAAGTGGTC GACGGAGCTG CGCGACATGA CGGTGTTTCA CGAGCTCCTG AACAAGAAGG GCGACCGCTT CGATTTCCGG ATAGGCAATC TTATTCCGGC GGACGCGCTC GACGGCGATC CGATGGAAGT AACCCGGGCA CTTGAGCGGC ATACGGTTCA AGCTCTGGCC GCCGACAGCG ACGCGGCGTT CGAGCCGTCT GTCCGGACAG GGTAG
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Protein sequence | MSRRDSASAL AHFAEAVALV SQGRPGHIVD TLIAERGQKI VRHPLWPVMR PLLYTLLNYR KAIEFANAVA NMPGFQAFEH LSSLLALEIR ADRPERIPEK GGFLLVSNHP TGIADGIAVF DLLKSRRPDM MFFANRDAIR VNPRFVEMVI PVEWREEHKS KLKARETLQV TNRAIEEGKA TVLFPSGRIA YWAEGRLNER PWKSSAVGFA RKYGLPILPV HMSARNSGLF YWFAKWSTEL RDMTVFHELL NKKGDRFDFR IGNLIPADAL DGDPMEVTRA LERHTVQALA ADSDAAFEPS VRTG
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