| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2854 |
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| Symbol | |
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| ID | 5323724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2980900 |
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| End bp | 2981826 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791799 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001328519 |
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| Protein GI | 150398052 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.87491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCT TCGTTCTCGT TCGGCTGCTC AGAGCCGTGA TCACGATCCT GGCCGTCGTG
ACCTTCGCTT TCGTCGTGCT GCGCATGTCG GGCGACCCGG CACAGGTGAT GCTTGGTCCC
GACGTGCCGC AAGACGCCGT CGATGCGTTC CGCAGAGCCT GGGGCCTCGA CCAGCCTCTC
TGGATACAAT ATCTCGCCTA TCTCAAGTCG ATCTTCACCG GCGATTTCGG TGTGTCCATG
CGCGACAAGG CGTCCGCACT CCAGCTGGTC CTGGAGCGCG TGCCGGCGAC GCTGCAACTG
ACGCTTCCGG CGCTGATCCT TAAGCTGATG ATCGGCATCC CCGCCGGCGT CTATGCGGCG
CTCCATCGCC AGAGTTTCGC CGATCGCGGC GTGATCACGC TGGCGATCAT AGGCTTTACC
GTCCCGTCCT TCGTTATGGG TCTCGTGCTC GTACTGATCT TTTCGGTGAT ACTCGGAGTG
TTGCCCTCCG GAGGCCAGGA TACGTGGGTG CATGGCGTTC TGCCGACGAT CACGATGAGT
ATTGGCGGGA TCGGCATTCT CGCCCGTTTC TCGCGTAGCG CCATGATCGA GGTGCTGGGG
CAGCCCTATA TCCGCACGGC CTCGGCGAAG GGGCTGAAAT GGCGCGACGT CATCTGGAGC
CATGCACTCC CCAATGCCGC GGTTCCGATC GTGACCATTG TCGGCTTCAT GGTCGGCTCG
CTGATTGCCG GCGCTGTGGT GGTGGAGTCG ATTTTCTCCT GGCCCGGCAT CGGGCGGCTG
CTGATCGTTT CGGTCAGCAA CCGCGACCTC GCCGTCGTGC AGTGCATCCT GCTGATCATC
GCTGCGGCAA TGGTGATGTC GAATCTCGTC GTCGACCTGC TTTATGGCTG GCTGGACCCG
CGGCTGCGTT CGCATGCCGC GCATTAG
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| Protein sequence | MIRFVLVRLL RAVITILAVV TFAFVVLRMS GDPAQVMLGP DVPQDAVDAF RRAWGLDQPL
WIQYLAYLKS IFTGDFGVSM RDKASALQLV LERVPATLQL TLPALILKLM IGIPAGVYAA
LHRQSFADRG VITLAIIGFT VPSFVMGLVL VLIFSVILGV LPSGGQDTWV HGVLPTITMS
IGGIGILARF SRSAMIEVLG QPYIRTASAK GLKWRDVIWS HALPNAAVPI VTIVGFMVGS
LIAGAVVVES IFSWPGIGRL LIVSVSNRDL AVVQCILLII AAAMVMSNLV VDLLYGWLDP
RLRSHAAH
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