Gene Smed_2845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2845 
Symbol 
ID5323715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2971817 
End bp2972629 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content65% 
IMG OID640791790 
Productribokinase-like domain-containing protein 
Protein accessionYP_001328510 
Protein GI150398043 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.50461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.552522 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT TTCGCTTTGC CGCCGTCGGC GACAATTGCA TAGACCGGTA TCGTGCGCCG 
CTTAGCCAAT CCTATGTCGG CGGGAACGCG ATCAATGTCG CCGTTCAGTT GGCAAGGCTC
GGGCACGGCT CCTTCTATTT CGGAGCCATC GGCCGCGATA CCGGCGGTGT CCAGGTGCGG
CGGCTGTTGC TGGAGAACGG CGTCCGGGTT GATCACCTGC GCGAATGCGA CACCAACACG
GCCTACACGG ACATCGACGT GACACCTGCC GGCGACCGGA TCTTCGTCCA TGAGGATTTC
GGCGCCTGTG CGGGCTATCG GCCGGACGAG GCGGAAGTCG AGCTGCTGAA GACCATGGAT
CATGTGCATA TCGGCTGGCT GGACGACGGC GGCGCTTTGC GTCGCGCGCT TTCTGCCGCC
GGCGTCAGCG TCTCTCAGGA TGTTTCGGTG AACGCGTCTG CGGCCGATCT CGGGGTTGAC
GGTCTTTCGA TCGCCTTCGG CTCCGCTGGT GAAGACGAGA CCGCTGCGGA ACGACTGGTC
AGCGATCTCC TCGCGCGCGG CGCGCAGCTC GCAGTCGTTA CGCGCGGCGC ACTCGGGTCG
GCTGCCAGCG ACGGAGCCGA GGTCGCATCC GCCGGCATCC GCCCGGTCGA AGTCGTGGAC
ACGACCGGCG CCGGCGACAG CTTCATTGCC GGCTTTATCG CCGCCCGCCT CGAAGGATAT
CGGCTTGCCG AGTGCCTGGA GGCCGGCAGG GACCTGGCAG CGAACACCTG CAAGCATGTC
GGGGGTTTTC CGCAGGACCC GCAATCGTTC TGA
 
Protein sequence
MTKFRFAAVG DNCIDRYRAP LSQSYVGGNA INVAVQLARL GHGSFYFGAI GRDTGGVQVR 
RLLLENGVRV DHLRECDTNT AYTDIDVTPA GDRIFVHEDF GACAGYRPDE AEVELLKTMD
HVHIGWLDDG GALRRALSAA GVSVSQDVSV NASAADLGVD GLSIAFGSAG EDETAAERLV
SDLLARGAQL AVVTRGALGS AASDGAEVAS AGIRPVEVVD TTGAGDSFIA GFIAARLEGY
RLAECLEAGR DLAANTCKHV GGFPQDPQSF