Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2845 |
Symbol | |
ID | 5323715 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2971817 |
End bp | 2972629 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640791790 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001328510 |
Protein GI | 150398043 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.50461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.552522 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAT TTCGCTTTGC CGCCGTCGGC GACAATTGCA TAGACCGGTA TCGTGCGCCG CTTAGCCAAT CCTATGTCGG CGGGAACGCG ATCAATGTCG CCGTTCAGTT GGCAAGGCTC GGGCACGGCT CCTTCTATTT CGGAGCCATC GGCCGCGATA CCGGCGGTGT CCAGGTGCGG CGGCTGTTGC TGGAGAACGG CGTCCGGGTT GATCACCTGC GCGAATGCGA CACCAACACG GCCTACACGG ACATCGACGT GACACCTGCC GGCGACCGGA TCTTCGTCCA TGAGGATTTC GGCGCCTGTG CGGGCTATCG GCCGGACGAG GCGGAAGTCG AGCTGCTGAA GACCATGGAT CATGTGCATA TCGGCTGGCT GGACGACGGC GGCGCTTTGC GTCGCGCGCT TTCTGCCGCC GGCGTCAGCG TCTCTCAGGA TGTTTCGGTG AACGCGTCTG CGGCCGATCT CGGGGTTGAC GGTCTTTCGA TCGCCTTCGG CTCCGCTGGT GAAGACGAGA CCGCTGCGGA ACGACTGGTC AGCGATCTCC TCGCGCGCGG CGCGCAGCTC GCAGTCGTTA CGCGCGGCGC ACTCGGGTCG GCTGCCAGCG ACGGAGCCGA GGTCGCATCC GCCGGCATCC GCCCGGTCGA AGTCGTGGAC ACGACCGGCG CCGGCGACAG CTTCATTGCC GGCTTTATCG CCGCCCGCCT CGAAGGATAT CGGCTTGCCG AGTGCCTGGA GGCCGGCAGG GACCTGGCAG CGAACACCTG CAAGCATGTC GGGGGTTTTC CGCAGGACCC GCAATCGTTC TGA
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Protein sequence | MTKFRFAAVG DNCIDRYRAP LSQSYVGGNA INVAVQLARL GHGSFYFGAI GRDTGGVQVR RLLLENGVRV DHLRECDTNT AYTDIDVTPA GDRIFVHEDF GACAGYRPDE AEVELLKTMD HVHIGWLDDG GALRRALSAA GVSVSQDVSV NASAADLGVD GLSIAFGSAG EDETAAERLV SDLLARGAQL AVVTRGALGS AASDGAEVAS AGIRPVEVVD TTGAGDSFIA GFIAARLEGY RLAECLEAGR DLAANTCKHV GGFPQDPQSF
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