| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2819 |
|---|
| Symbol | |
|---|
| ID | 5323689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sinorhizobium medicae WSM419 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009636 |
|---|
| Strand | - |
|---|
| Start bp | 2943849 |
|---|
| End bp | 2944619 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640791764 |
|---|
| Product | precorrin 6A synthase |
|---|
| Protein accession | YP_001328484 |
|---|
| Protein GI | 150398017 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2243] Precorrin-2 methylase |
|---|
| TIGRFAM ID | [TIGR01467] precorrin-2 C20-methyltransferase
[TIGR02434] precorrin-6A synthase (deacetylating) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.615759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCACA TCCTGATCAT CGGTATCGGC GCGGGTAACC CCGAGCACAT CACGGTCCAG
GCGATCAATG CGCTGAACAG AGCCGATGTG CTGTTCATCC CGACGAAGGG TGCGAAGAGG
TCCGAACTCG CCGAGCTTCG CCGCGAGATC TGTGCCCGCT ACGTGACGAG GGCCGACAGC
CGGACCATTG AATTCGCCGT GCCCGTTCGC CGAACCGAAG GGCGGGCGTA TATCGAAAGC
GTGGACGACT GGCATGCGAG TATTGCCGCC ACTTACGAGG CTCTCCTCGA GAGCGAGCTT
GCCGATGGAC AGACCGGCGC GTTTCTTGTC TGGGGCGATC CGATGCTCTA TGACAGCACG
ATCCGCATCG TCGAGCGCGT GAAGGCGCGC GGCCGCATTG GCTTCGGCTT TGACGTCATT
CCGGGCATTA CCAGCCTGCA GGCGCTCTGC GCCAGCCATC GCATTCCGTT GAACCTCGTC
GGCAAACCGG TGGAAATCAC CACCGGCCGG AGGCTCGCCG AGAGCTTTCC GCACAGGTGC
GAGACGGCGG TCGTCATGCT CGACGGCGAG CAGGCCTTTC AGAAGATCGA GGATCCCGAC
GCCGAGATCT ATTGGGGCGC CTATCTCGGC AGCCCCGAAG AGATCGTCAT TTCAGGGCGC
CTTGCCGACG TCAAAGAGGA AATTCTGAAA ACCCGTGCTG CGGCACGCGA GCGGGTAGGC
TGGATCATGG ACATATATCT TTTGCGAAAA GGCGCCGATT TCGACGAATA G
|
|---|
| Protein sequence | MRHILIIGIG AGNPEHITVQ AINALNRADV LFIPTKGAKR SELAELRREI CARYVTRADS
RTIEFAVPVR RTEGRAYIES VDDWHASIAA TYEALLESEL ADGQTGAFLV WGDPMLYDST
IRIVERVKAR GRIGFGFDVI PGITSLQALC ASHRIPLNLV GKPVEITTGR RLAESFPHRC
ETAVVMLDGE QAFQKIEDPD AEIYWGAYLG SPEEIVISGR LADVKEEILK TRAAARERVG
WIMDIYLLRK GADFDE
|
|---|
| |