| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2797 |
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| Symbol | |
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| ID | 5323667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2918560 |
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| End bp | 2919399 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640791742 |
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| Product | transcription activator effector binding |
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| Protein accession | YP_001328462 |
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| Protein GI | 150397995 |
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| COG category | [K] Transcription
[S] Function unknown |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3708] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.338998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCCA TTGCAAGGGC GATCTGGTTC ATCGAAAGCC ATTTCGCCGA AGACATATCA
CTGGACGATA TCGCTGCAGC CGCCGGCCTG TCGCGCTATC ATCTTTCGCG CGTGTTCGGA
CTTTCGGCCG GCCGCTCGAT CAGCGCCTAT ATCCGAGGCA GGCGCCTGAG CGGTGCCGCG
CTTGACCTTG CCAACGGCAC ATCCGGCATT CTCGAAGTGG CCCTCGAGGC GGGCTACGGC
TCGCACGAGG CTTTCACCCG TGCCTTTCGC GAACAGTTCG GGGTGACGCC TGAATCCATC
CGCAAGCAGG GGCACGTCCG CAATATCGAT CTTTTGGAGC CGATCAGAAT GGACGACACA
CGCACTTTGA AGATCGAACC GCCCCGGTTC GAAGAAAGCC CGGGGCTCCT TCTCGCAGGT
CTCGCAGAGA CCTATGACTA CAACCGAACC GAAGGCATTC CTTCTCTCTG GCAGCGTTTC
AGCGCCTATT TCGGCAACAT TCCCGGACAA CGCGGCAACA CCGCCTATGG CGTCTGCACC
CAGTCCGACG GCGAGGCGGG CCGCTTCCGC TACATGGCTG CGGCGGAAAT AAGAGACAAC
GAAGCGCTGC CCGCAGGGTT TTCAACACTC AGGCTGCCAC GGCAGCGTTA CGCGATCTTC
GTCCATCGCG GGCATATTTC TGAAATCGCC GCCACCGCCC ACCACATCTT CAAGACCTGG
TTTCCGGAAT CCGGCTATCG GCACGGCGAA ATGCCCGACC TGATGGAGCG GTACGACGAG
CGCTTCGATC CGCATTCCGG CATGGGTGCG GTCGAGATGT GGGTGCCTTT GAAGGGCTGA
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| Protein sequence | MSAIARAIWF IESHFAEDIS LDDIAAAAGL SRYHLSRVFG LSAGRSISAY IRGRRLSGAA
LDLANGTSGI LEVALEAGYG SHEAFTRAFR EQFGVTPESI RKQGHVRNID LLEPIRMDDT
RTLKIEPPRF EESPGLLLAG LAETYDYNRT EGIPSLWQRF SAYFGNIPGQ RGNTAYGVCT
QSDGEAGRFR YMAAAEIRDN EALPAGFSTL RLPRQRYAIF VHRGHISEIA ATAHHIFKTW
FPESGYRHGE MPDLMERYDE RFDPHSGMGA VEMWVPLKG
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