| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2788 |
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| Symbol | |
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| ID | 5323658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 2907028 |
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| End bp | 2908080 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640791733 |
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| Product | xylose isomerase domain-containing protein |
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| Protein accession | YP_001328453 |
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| Protein GI | 150397986 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0951209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA TCAAAGGGCC GGGGCTGTTC CTTGCGCAAT TCGCCGGCGA TGCCGCACCT
TTCAATTCCT GGGATTCGAT CACCAAATGG GCAGCCGATT GCGGCTATAA AGGCGTGCAG
GTCCCGAGCT GGGACGGGCG GCTGTTCGAT CTGAAGAAGG CAGCCGAATC GAAAGCCTAT
TGTGACGAGA TCGCCGGCAA GGCGCGCGAC AACGGCGTGG AGATCACCGA ACTTTCGACC
CACCTCCAGG GCCAGCTCGT CGCGGCTCAT CCGGCTTATG ACGAGGCATT CGACGGTTTC
GCCGTTCCGG AAGTGCGCGG CAACCCTAGG GCACGGCAGG AATGGGCGGT CGAGCAGGTA
AAGCTGGCGC TGACGGCCTC GAAGAATCTT GGTCTCGATG CAATGGCAAG CTTTTCCGGC
GCGCTGGCAT GGCCCTTCGT CTATCCGTGG CCGCAGCGTC CGGCGGGCCT GGTGGAAACG
GCCTTCGACG AACTCGCACG GCGGTGGAAG CCGATCCTTG ACCATGCAGA GGATTGCGGC
GTCGACGTGT GCTACGAGAT CCATCCGGGC GAGGACCTGT ATGACGGCAT CACCTATGAG
ATGTTCCTTG AGCGTACCGG CAATCACGCC CGCGCCTGCA TGCTCTACGA CCCGTCACAC
TACGTGCTGC AGTGCCTGGA CTATCTCGAG AATATCGACA TCTACAAGGA TCGGATCCGG
ATGTTCCACG TCAAGGACGC GGAGTTCAAC CCGACCGGGC GCCAGGGCGT TTATGGCGGT
TACCAGAGCT GGGTGAACCG GGCCGGCCGT TTCCGCTCGC TCGGCGATGG CCAGGTGGAT
TTCGGCGCGG TCTTTTCCAA GATGACGGCG AATGATTTTA CCGGCTGGGC GGTGGTCGAG
TGGGAATGCT GCCTCAAGCA CCCGGAAGAC GGCGCGCGCG AGGGGGCCGA GTTCGTGAAG
GCGCATATCA TCCGCGTCAC CGAAAAGGCC TTTGACGATT TCGCCGACAG CGGCACCGAC
GAAGCCGCGA ACCGGCGGAT GCTGGGAATT TAG
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| Protein sequence | MKTIKGPGLF LAQFAGDAAP FNSWDSITKW AADCGYKGVQ VPSWDGRLFD LKKAAESKAY
CDEIAGKARD NGVEITELST HLQGQLVAAH PAYDEAFDGF AVPEVRGNPR ARQEWAVEQV
KLALTASKNL GLDAMASFSG ALAWPFVYPW PQRPAGLVET AFDELARRWK PILDHAEDCG
VDVCYEIHPG EDLYDGITYE MFLERTGNHA RACMLYDPSH YVLQCLDYLE NIDIYKDRIR
MFHVKDAEFN PTGRQGVYGG YQSWVNRAGR FRSLGDGQVD FGAVFSKMTA NDFTGWAVVE
WECCLKHPED GAREGAEFVK AHIIRVTEKA FDDFADSGTD EAANRRMLGI
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