Gene Smed_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2709 
Symbol 
ID5323578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2818041 
End bp2819291 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content63% 
IMG OID640791653 
Producthypothetical protein 
Protein accessionYP_001328374 
Protein GI150397907 
COG category[S] Function unknown 
COG ID[COG2845] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.679354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGA CCCGATACCG GGGAAAGGGA CTGCGTCTGC TGCGACTGGC TCCGGTCATG 
ATCGGCGCAA TAGCAATGAT AGCCGCCGGC CTCTTTGCCA CCGCCGCCGA GGCACAGGAG
CCCGTACCCC GGCGCAACGT GCTGCAAAGG CTTTTCGGTG TCTTCACGCC GCAAAGGCGC
GTCTACCATC AGGACCAGTA CGATTTTCGG CGTCAGCCCC GCCCGCAGCG CATACAGAAG
CGCCGCCCGC AACCGTCCGA AACGCGGCAG TCGCGCCCGA GCCGGTCCAA GGCACGGCCA
GTCGCGGCAC CACCGCCGCC GCCAGTCGTC GTGGAGAAAT CTCCCAACGC CAAAAAGGTC
CTCGTCGTCG GAGACTTCGT TGCCGGAAGC CTTGGTGACG GATTGAAGGC TGCATTCGAA
ACAACGCCCG GCATCGTGAT CGAGACGCGC GCCAACGGTT CTTCCGGCGT CGTCCGGAAC
GACTATTTCG ACTGGCCGAA GGCCATGTCG GACTACATCG CGGAAATCAA ACCCGCCGTC
ATCGTCGTGA GCCTCGGCGC CAATGATCGC CAGTTGATGC GGATCGGGGA AACGCGGGAG
AAATTCCGGA CCAATGCCTG GATGGAGGAG TACCGCAAGC GCGTCGCCGC GCTGGCGACC
CTTGCGCGGA AGGACGAACT CCCGGTCCTC TGGGTTGGAA TGCCGCCCTT TCAATCGACT
TCGATGACTG CCGACATGGT CACGTTCAAC GGCATCTACC GCGAGGAGGT CGAGAAGGTC
GGCGGACAGT TCATCGACAT CTGGGACGGT TTCGTCGACG AAGATGGCAA GTTCGTTCTG
ACCGGCTCGG ACATCAACGG CCAGCAGGTC CGGCTAAGGG GATCGGACGG CATCAACCTG
ACCAAGGCCG GCAAACGCAA ATTGGCTTTT TATGTCGAAA GGGATATCCG CAGGCTACTG
GGCGAAGCGG CCGCAGCCAC GGACGTACCG GGCGCGGAGG GCCTCAAGGA TCTTGTCGTC
AGCAAGCCGC TTGCCAACGA AGATATCATC AAGACGCAGC CGATCAGCCT CATCGATCCG
GAACTCGACG GTGCCACCGC CCTTCTCGGC GGCGATACAC CGCTCAAGAG CACGGGCAAA
AGCCCGCGCG ACCGGCTCGT GGAAAAGGGC GAGGTGGTCG CCGCGCCGCC GGGGCGTATC
GACGATTTCC GGCTTGCCAA ACAGGGTCCG CCAGGCAGTT CCACCCGTTG A
 
Protein sequence
MMTTRYRGKG LRLLRLAPVM IGAIAMIAAG LFATAAEAQE PVPRRNVLQR LFGVFTPQRR 
VYHQDQYDFR RQPRPQRIQK RRPQPSETRQ SRPSRSKARP VAAPPPPPVV VEKSPNAKKV
LVVGDFVAGS LGDGLKAAFE TTPGIVIETR ANGSSGVVRN DYFDWPKAMS DYIAEIKPAV
IVVSLGANDR QLMRIGETRE KFRTNAWMEE YRKRVAALAT LARKDELPVL WVGMPPFQST
SMTADMVTFN GIYREEVEKV GGQFIDIWDG FVDEDGKFVL TGSDINGQQV RLRGSDGINL
TKAGKRKLAF YVERDIRRLL GEAAAATDVP GAEGLKDLVV SKPLANEDII KTQPISLIDP
ELDGATALLG GDTPLKSTGK SPRDRLVEKG EVVAAPPGRI DDFRLAKQGP PGSSTR