Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2709 |
Symbol | |
ID | 5323578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2818041 |
End bp | 2819291 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791653 |
Product | hypothetical protein |
Protein accession | YP_001328374 |
Protein GI | 150397907 |
COG category | [S] Function unknown |
COG ID | [COG2845] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.679354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGACGA CCCGATACCG GGGAAAGGGA CTGCGTCTGC TGCGACTGGC TCCGGTCATG ATCGGCGCAA TAGCAATGAT AGCCGCCGGC CTCTTTGCCA CCGCCGCCGA GGCACAGGAG CCCGTACCCC GGCGCAACGT GCTGCAAAGG CTTTTCGGTG TCTTCACGCC GCAAAGGCGC GTCTACCATC AGGACCAGTA CGATTTTCGG CGTCAGCCCC GCCCGCAGCG CATACAGAAG CGCCGCCCGC AACCGTCCGA AACGCGGCAG TCGCGCCCGA GCCGGTCCAA GGCACGGCCA GTCGCGGCAC CACCGCCGCC GCCAGTCGTC GTGGAGAAAT CTCCCAACGC CAAAAAGGTC CTCGTCGTCG GAGACTTCGT TGCCGGAAGC CTTGGTGACG GATTGAAGGC TGCATTCGAA ACAACGCCCG GCATCGTGAT CGAGACGCGC GCCAACGGTT CTTCCGGCGT CGTCCGGAAC GACTATTTCG ACTGGCCGAA GGCCATGTCG GACTACATCG CGGAAATCAA ACCCGCCGTC ATCGTCGTGA GCCTCGGCGC CAATGATCGC CAGTTGATGC GGATCGGGGA AACGCGGGAG AAATTCCGGA CCAATGCCTG GATGGAGGAG TACCGCAAGC GCGTCGCCGC GCTGGCGACC CTTGCGCGGA AGGACGAACT CCCGGTCCTC TGGGTTGGAA TGCCGCCCTT TCAATCGACT TCGATGACTG CCGACATGGT CACGTTCAAC GGCATCTACC GCGAGGAGGT CGAGAAGGTC GGCGGACAGT TCATCGACAT CTGGGACGGT TTCGTCGACG AAGATGGCAA GTTCGTTCTG ACCGGCTCGG ACATCAACGG CCAGCAGGTC CGGCTAAGGG GATCGGACGG CATCAACCTG ACCAAGGCCG GCAAACGCAA ATTGGCTTTT TATGTCGAAA GGGATATCCG CAGGCTACTG GGCGAAGCGG CCGCAGCCAC GGACGTACCG GGCGCGGAGG GCCTCAAGGA TCTTGTCGTC AGCAAGCCGC TTGCCAACGA AGATATCATC AAGACGCAGC CGATCAGCCT CATCGATCCG GAACTCGACG GTGCCACCGC CCTTCTCGGC GGCGATACAC CGCTCAAGAG CACGGGCAAA AGCCCGCGCG ACCGGCTCGT GGAAAAGGGC GAGGTGGTCG CCGCGCCGCC GGGGCGTATC GACGATTTCC GGCTTGCCAA ACAGGGTCCG CCAGGCAGTT CCACCCGTTG A
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Protein sequence | MMTTRYRGKG LRLLRLAPVM IGAIAMIAAG LFATAAEAQE PVPRRNVLQR LFGVFTPQRR VYHQDQYDFR RQPRPQRIQK RRPQPSETRQ SRPSRSKARP VAAPPPPPVV VEKSPNAKKV LVVGDFVAGS LGDGLKAAFE TTPGIVIETR ANGSSGVVRN DYFDWPKAMS DYIAEIKPAV IVVSLGANDR QLMRIGETRE KFRTNAWMEE YRKRVAALAT LARKDELPVL WVGMPPFQST SMTADMVTFN GIYREEVEKV GGQFIDIWDG FVDEDGKFVL TGSDINGQQV RLRGSDGINL TKAGKRKLAF YVERDIRRLL GEAAAATDVP GAEGLKDLVV SKPLANEDII KTQPISLIDP ELDGATALLG GDTPLKSTGK SPRDRLVEKG EVVAAPPGRI DDFRLAKQGP PGSSTR
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