Gene Smed_2694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2694 
Symbol 
ID5323563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2800573 
End bp2801637 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content63% 
IMG OID640791638 
ProductABC transporter related 
Protein accessionYP_001328359 
Protein GI150397892 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCG TGGAATATCA ACGAATTGGC AAGTCCTTCG GTGCCGTCAC GATCATGCGC 
GACATCTCTT TCCGGATCGA GGATCACGAA TTCGTGGTCC TGCTCGGCCC GTCGGGTTGC
GGCAAGACGA CCTTGCTCAG AATGACGGCC GGGCTCGAGG CCGTCAGCCA GGGCGACCTC
ATGATCGGCG GCAAACGCGT CAACGACGTG CACCCGCGCG ACCGCTCGAT CGCGATGGTC
TTTCAGAACT ACGCGCTCTA CCCGACGATG AAGGTTTACG ACAACATCGC CTTCAGCCTG
GAAGTGGCGA AAGTTCCGCC TGCGGAGATC AAGAGCCGGG TGGAATGGGC GGCCGCGACG
CTCAACCTCA CCCCCTATCT CGGCCGCTAT CCGAAGGAGC TTTCCGGCGG CCAGCGGCAG
CGTGTCGCGA TGGGCCGCGC CATGGTGCGC GAGGCGGAAG TCTTCCTTTT CGACGAGCCG
CTCTCGAATC TCGATGCCAA GCTGCGTGCC CATATGCGCA CGGAAATCCG TCAGCTGCAC
AACCGGCTGA AGACAACCAC GATCTACGTC ACGCATGACC AGATCGAGGC CATGACCATG
GCCGACAAGA TCGTCGTCAT GCGCGCCGGC AAGATCGAGC AGATAGGCTC GCCCGACGAC
GTCTACGACC GGCCGGCCAG CAAATACGTC GCCGATTTCA TAGGCTCGTC TTCCATCAAT
TTCCTCCCCG GCACCGTGGT CGTCGACAAT GGCGGGCCTG CCGTCGACAC CACGACCGGC
CGGGTGAGCG TCGAGCCTTC GCCTGCACTA AAGCCAGGGC ACAAGGTCGT CCTCGGCCTG
CGCCCGACCG ACGTGGTCGT CGATGCAGGC GGCCCGCTTG CAGCGAAGGC GATCCTCACC
GAGCGGCTCG GCCATGACGC GCAGCTTTTT TGCGAAGGTC CGGAGGGAAG CTTCGTTGCC
GTCGTCGACA AGGCGGCACG TTTTTCGGAG GGCGCCGAGG TCCGCTTCGC GATCCCGCCT
TCGAAGGTTC ACGTTTTCGA TGCCGAAACA GAGATCCGCA TTTGA
 
Protein sequence
MATVEYQRIG KSFGAVTIMR DISFRIEDHE FVVLLGPSGC GKTTLLRMTA GLEAVSQGDL 
MIGGKRVNDV HPRDRSIAMV FQNYALYPTM KVYDNIAFSL EVAKVPPAEI KSRVEWAAAT
LNLTPYLGRY PKELSGGQRQ RVAMGRAMVR EAEVFLFDEP LSNLDAKLRA HMRTEIRQLH
NRLKTTTIYV THDQIEAMTM ADKIVVMRAG KIEQIGSPDD VYDRPASKYV ADFIGSSSIN
FLPGTVVVDN GGPAVDTTTG RVSVEPSPAL KPGHKVVLGL RPTDVVVDAG GPLAAKAILT
ERLGHDAQLF CEGPEGSFVA VVDKAARFSE GAEVRFAIPP SKVHVFDAET EIRI