| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_2647 |
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| Symbol | |
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| ID | 5323516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 2750954 |
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| End bp | 2751934 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640791591 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001328312 |
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| Protein GI | 150397845 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.865704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCCA TCAGGTTTTC TTATGGCGCC AGCATGGTAA ATCCGCTCGA CAGCGATCTC
CTCAGAACCT TTCTCGCCGT TGCCGATACC GGCAACGTGA CGCGGGCTGC CGACATCGTG
CGCCGCACGC AATCGGCGGT CAGCATGCAG ATTCGCAAGC TCGAGGAGCT CATCGGCTCC
GCGCTGTTCG AACGCCATTC GCGCGGCGTG ATACTGACGG ACGAGGGCCG GCGTCTGGTC
GACAACGCAC GCCGTATCGT AACCCTTCTC GACGACACGG CGGCAGCGAT GCGCTCACCG
GCGCTTGACG GTTCGGTCCG GATCGGGATT TCGGAAGAGT ATATCAACTC CACACTCCCG
AAGGCGCTCG GTGCTTTCGC GGCCATTCAT CCTGGCGTGG AAGTGACGGT GCGGCAGGAT
ACCTCGATGT CCAATACGGC AGCGCTCGCG GCCGGAGAAA TCGACATCGC CGTCGTCTTC
GAGCCGGGCG GACGCACCCG GAGCGAGGTT CTCATGGTGA ATCCTACCGT ATGGGTGACC
TGCGACCAGC ATGGCGCCCA CCAAAGGCAG CCGTTACCGA TCGCCACCTA TACATATGCG
GAAGGCGGCT GGTGCGACGA CCTGGCTCTG CGGAGCCTGA AGGCGCGCGG CCTGGAGTGC
CGCATCGCCT ATGTGAGCCG CACGAGCGGC GGGCTCATTG CTGCCGTCCT GTCGGGCCTT
GCGATCGCAC CTTTATCGCG AAGCTCCATA CCGGCCGGCT GCCGCGAACT CACCGAGGAA
GACGGCTTCG GTATCATCGA CATGTCGAAC GTGGTGCTGC GAACGAGGCG CGAGAACCGG
TCGCCGACGG TCAACGCCAT GGCGGATGCC ATCCGACGCG CCTTTCGAGC ACCGGCCAGG
CTGGAAGGGG CCGAGCAGGA AAAGGAAGAA GCGCGATCCA CAACGACCGA TGGATTTTTT
ACGATCCCGG GTACCTACTA G
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| Protein sequence | MAAIRFSYGA SMVNPLDSDL LRTFLAVADT GNVTRAADIV RRTQSAVSMQ IRKLEELIGS
ALFERHSRGV ILTDEGRRLV DNARRIVTLL DDTAAAMRSP ALDGSVRIGI SEEYINSTLP
KALGAFAAIH PGVEVTVRQD TSMSNTAALA AGEIDIAVVF EPGGRTRSEV LMVNPTVWVT
CDQHGAHQRQ PLPIATYTYA EGGWCDDLAL RSLKARGLEC RIAYVSRTSG GLIAAVLSGL
AIAPLSRSSI PAGCRELTEE DGFGIIDMSN VVLRTRRENR SPTVNAMADA IRRAFRAPAR
LEGAEQEKEE ARSTTTDGFF TIPGTY
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