Gene Smed_2642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2642 
Symbol 
ID5323511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2743248 
End bp2744081 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content63% 
IMG OID640791586 
Producthypothetical protein 
Protein accessionYP_001328307 
Protein GI150397840 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.771371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC GATACCTTGC CTACGCTTTG ACCGTGATCT GGCTCACCCA TGCGCTCTGG 
CCGCAGCCGG CTCACGCGCA ACAGGCGCCA ACCCCCGTGA GCCAGTGCCA GGCGATTGCG
GCAGCGGCGC CGGCGGCAAG CTTCGCCAGC TTCTCGGTCC CTGCGGCCGT GCCGGTGGCC
TCGGCCGATA CGGGCGAGGT GACGATCACC TTTGTCGGGC ATTCGACTTT CCTGATCGAA
ACGCCGGATG GGGTTTCGAT CGCCACGGAT TACAACGGCT GGTTCCGCAC GCCGTCGGCG
CCTGACGTCG TGACGATGAA CAGGGCCCAT TCGAGCCATT ATACTCTGTC GCCGGATCCG
GCGATCGAGC ATGTCCTGCA TGGCTGGCGC GACGACGGCA CGCCGGCCGA TCACGACCTT
GTCGTCGGCG ACGCCTACAT CCGCAATGTG ACCACGGATA TCCGGTCCGG CTTCGAGGGA
ATGATACCGG ACGCCAATTC GATCTTCATC TTCGAGGTTG CGGGGCTCTG CATCGGCCAT
CTCGGCCACC TTCACCACGA ACTCGATGAA AGCCATTACC GGCAGATCGG CAGGCTCGAC
GTGCTGATGG TGCCGGTCGA CGGCGGGCTG ACGATGGGAG CGGAAAGCAT GAGCCGCGTC
GTCTCGCGGC TGCGCTCGGC GCTGATCCTG CCCATGCACA GGCCGTTGAC CAACGACTTT
CTGGCGATGT TCGGCGACGA GTTCGACAAG AGCTTCGCCA CCGAACCGTC CGTCAAGGTA
TCGCTCCGTT CTTTGCCGAA GAGGCCGCTC ATCTATGTTC TCCAGGGCGT TTGA
 
Protein sequence
MLLRYLAYAL TVIWLTHALW PQPAHAQQAP TPVSQCQAIA AAAPAASFAS FSVPAAVPVA 
SADTGEVTIT FVGHSTFLIE TPDGVSIATD YNGWFRTPSA PDVVTMNRAH SSHYTLSPDP
AIEHVLHGWR DDGTPADHDL VVGDAYIRNV TTDIRSGFEG MIPDANSIFI FEVAGLCIGH
LGHLHHELDE SHYRQIGRLD VLMVPVDGGL TMGAESMSRV VSRLRSALIL PMHRPLTNDF
LAMFGDEFDK SFATEPSVKV SLRSLPKRPL IYVLQGV