Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2642 |
Symbol | |
ID | 5323511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2743248 |
End bp | 2744081 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791586 |
Product | hypothetical protein |
Protein accession | YP_001328307 |
Protein GI | 150397840 |
COG category | [R] General function prediction only |
COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.771371 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGC GATACCTTGC CTACGCTTTG ACCGTGATCT GGCTCACCCA TGCGCTCTGG CCGCAGCCGG CTCACGCGCA ACAGGCGCCA ACCCCCGTGA GCCAGTGCCA GGCGATTGCG GCAGCGGCGC CGGCGGCAAG CTTCGCCAGC TTCTCGGTCC CTGCGGCCGT GCCGGTGGCC TCGGCCGATA CGGGCGAGGT GACGATCACC TTTGTCGGGC ATTCGACTTT CCTGATCGAA ACGCCGGATG GGGTTTCGAT CGCCACGGAT TACAACGGCT GGTTCCGCAC GCCGTCGGCG CCTGACGTCG TGACGATGAA CAGGGCCCAT TCGAGCCATT ATACTCTGTC GCCGGATCCG GCGATCGAGC ATGTCCTGCA TGGCTGGCGC GACGACGGCA CGCCGGCCGA TCACGACCTT GTCGTCGGCG ACGCCTACAT CCGCAATGTG ACCACGGATA TCCGGTCCGG CTTCGAGGGA ATGATACCGG ACGCCAATTC GATCTTCATC TTCGAGGTTG CGGGGCTCTG CATCGGCCAT CTCGGCCACC TTCACCACGA ACTCGATGAA AGCCATTACC GGCAGATCGG CAGGCTCGAC GTGCTGATGG TGCCGGTCGA CGGCGGGCTG ACGATGGGAG CGGAAAGCAT GAGCCGCGTC GTCTCGCGGC TGCGCTCGGC GCTGATCCTG CCCATGCACA GGCCGTTGAC CAACGACTTT CTGGCGATGT TCGGCGACGA GTTCGACAAG AGCTTCGCCA CCGAACCGTC CGTCAAGGTA TCGCTCCGTT CTTTGCCGAA GAGGCCGCTC ATCTATGTTC TCCAGGGCGT TTGA
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Protein sequence | MLLRYLAYAL TVIWLTHALW PQPAHAQQAP TPVSQCQAIA AAAPAASFAS FSVPAAVPVA SADTGEVTIT FVGHSTFLIE TPDGVSIATD YNGWFRTPSA PDVVTMNRAH SSHYTLSPDP AIEHVLHGWR DDGTPADHDL VVGDAYIRNV TTDIRSGFEG MIPDANSIFI FEVAGLCIGH LGHLHHELDE SHYRQIGRLD VLMVPVDGGL TMGAESMSRV VSRLRSALIL PMHRPLTNDF LAMFGDEFDK SFATEPSVKV SLRSLPKRPL IYVLQGV
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