Gene Smed_2632 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2632 
Symbol 
ID5323501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2734298 
End bp2734741 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content62% 
IMG OID640791576 
ProductPol-Pal system-associated acyl-CoA thioesterase 
Protein accessionYP_001328297 
Protein GI150397830 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family
[TIGR02799] tol-pal system-associated acyl-CoA thioesterase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGA TTTCGCTTGC TGGCGAGCTG ACGGAGACCG GTCACCGGCT GATCCAGCGG 
GTCTATTACG AGGACACCGA CTTCTCGGGC GTCGTCTACC ATGCGCGCTA CCTCCATTTC
ATGGAGCGCG CGCGTACCGA CTACTTGCGG CTTCTGGGCG TCGAGCAGGC GTCGCTCGCG
ATCGAAGGAG ACGTGGAAGG CCTGGTCTTC GTCGTCCATC GGATGGAGAT CGACTTCAAG
TCGCCGGCGC GCATGGACGA CGTCCTGACG ATCGAGACGG GGACCGAGAA GGCGGGCGGG
GCCAAGATGA TCCTGCAGCA GCAGATCAGG CGGGGCGAAT CGCTGCTGAT CGCGGCCAAG
GTGATCATTG CGGTCATCAA CGGCCAAGGG CGGCCAAGGC GCCTGCCTGA AGCATTGGCA
ACGAAATTTT TCAAAGCGGG GTGA
 
Protein sequence
MSLISLAGEL TETGHRLIQR VYYEDTDFSG VVYHARYLHF MERARTDYLR LLGVEQASLA 
IEGDVEGLVF VVHRMEIDFK SPARMDDVLT IETGTEKAGG AKMILQQQIR RGESLLIAAK
VIIAVINGQG RPRRLPEALA TKFFKAG