Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2611 |
Symbol | |
ID | 5323480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2706857 |
End bp | 2707684 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640791555 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001328276 |
Protein GI | 150397809 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.523755 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGGC CTCTCCTTCG CATCGACGAT CCGGCGGACC CGCGCATAGC CGGGTTGGTG TCGATCAAAG AGCGCGATTT GACCGGCCGT CAGGGCCGCT TCATCGCCGA AGGTACCGTC GTGCTGAGAA TGCTCGCCGC CGCGCACAGC GCGCGGCGCG GTATCGCTGC CGAGGCGATC CTGCTCCTCG AGAGCCGGGT CTTCGGTTTG GCGGAGCTGC TCGCGCAGTT TCCGCCCGAC GTCCCCCTCT ATGTGGCGAC CAGCGCAGTC TTCGATGCTA TCGCCGGTTT CAATATGCAT CGCGGCGTCC TGGCGCTAGG CCGGCGCGAC GCCGCGCCGG AGCAGGAGGC GCTGATTGCA GGGTTGCCGC AGTCGAGCCT CGTGCTCGCG GCCTGCGGCA TATCGAACCA CGACAATATG GGATCGCTGT TTCGCAATGC GGCGGCTTTC GGGGCCGATG CTGTGCTGAT GGATATGGCG AGCTGCGATC CGATGTACCG CAAGGCAATC CGCGTCTCCG TCGGGTCGGT GCTGACCCTG CCTTTTGCGC GCGAGGGTGG TGCGGCAGAG CTGATCGGGC GCCTGCAGGC CGCAGACTTC GTCGTCTGGG GCCTGTCGCC GCGCGGCGCC GTGGACATCA CCGCAATTCC GCCGGCGCCG CGCACAGCAT TGCTGGTCGG TACCGAAGGC GAGGGGCTGC CCGAAGCTAT CCTTTCGCAG ATCCACACTG CCCGCATCCG CCAGCGGCCG GGCCTGGACA GCCTGAACGT GGCCATGGCG GCGGGCATCG CGCTGCACCA GGTCGCAAAT ATCAACGGGA GGATTTGA
|
Protein sequence | MTRPLLRIDD PADPRIAGLV SIKERDLTGR QGRFIAEGTV VLRMLAAAHS ARRGIAAEAI LLLESRVFGL AELLAQFPPD VPLYVATSAV FDAIAGFNMH RGVLALGRRD AAPEQEALIA GLPQSSLVLA ACGISNHDNM GSLFRNAAAF GADAVLMDMA SCDPMYRKAI RVSVGSVLTL PFAREGGAAE LIGRLQAADF VVWGLSPRGA VDITAIPPAP RTALLVGTEG EGLPEAILSQ IHTARIRQRP GLDSLNVAMA AGIALHQVAN INGRI
|
| |