Gene Smed_2611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2611 
Symbol 
ID5323480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2706857 
End bp2707684 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content67% 
IMG OID640791555 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001328276 
Protein GI150397809 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.523755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC CTCTCCTTCG CATCGACGAT CCGGCGGACC CGCGCATAGC CGGGTTGGTG 
TCGATCAAAG AGCGCGATTT GACCGGCCGT CAGGGCCGCT TCATCGCCGA AGGTACCGTC
GTGCTGAGAA TGCTCGCCGC CGCGCACAGC GCGCGGCGCG GTATCGCTGC CGAGGCGATC
CTGCTCCTCG AGAGCCGGGT CTTCGGTTTG GCGGAGCTGC TCGCGCAGTT TCCGCCCGAC
GTCCCCCTCT ATGTGGCGAC CAGCGCAGTC TTCGATGCTA TCGCCGGTTT CAATATGCAT
CGCGGCGTCC TGGCGCTAGG CCGGCGCGAC GCCGCGCCGG AGCAGGAGGC GCTGATTGCA
GGGTTGCCGC AGTCGAGCCT CGTGCTCGCG GCCTGCGGCA TATCGAACCA CGACAATATG
GGATCGCTGT TTCGCAATGC GGCGGCTTTC GGGGCCGATG CTGTGCTGAT GGATATGGCG
AGCTGCGATC CGATGTACCG CAAGGCAATC CGCGTCTCCG TCGGGTCGGT GCTGACCCTG
CCTTTTGCGC GCGAGGGTGG TGCGGCAGAG CTGATCGGGC GCCTGCAGGC CGCAGACTTC
GTCGTCTGGG GCCTGTCGCC GCGCGGCGCC GTGGACATCA CCGCAATTCC GCCGGCGCCG
CGCACAGCAT TGCTGGTCGG TACCGAAGGC GAGGGGCTGC CCGAAGCTAT CCTTTCGCAG
ATCCACACTG CCCGCATCCG CCAGCGGCCG GGCCTGGACA GCCTGAACGT GGCCATGGCG
GCGGGCATCG CGCTGCACCA GGTCGCAAAT ATCAACGGGA GGATTTGA
 
Protein sequence
MTRPLLRIDD PADPRIAGLV SIKERDLTGR QGRFIAEGTV VLRMLAAAHS ARRGIAAEAI 
LLLESRVFGL AELLAQFPPD VPLYVATSAV FDAIAGFNMH RGVLALGRRD AAPEQEALIA
GLPQSSLVLA ACGISNHDNM GSLFRNAAAF GADAVLMDMA SCDPMYRKAI RVSVGSVLTL
PFAREGGAAE LIGRLQAADF VVWGLSPRGA VDITAIPPAP RTALLVGTEG EGLPEAILSQ
IHTARIRQRP GLDSLNVAMA AGIALHQVAN INGRI