Gene Smed_2607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2607 
Symbol 
ID5323476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2703353 
End bp2703715 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content60% 
IMG OID640791551 
Productresponse regulator receiver protein 
Protein accessionYP_001328272 
Protein GI150397805 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.212729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGCGCT TGATGATAGC TGACGGGTCG GATGTTGTGC GCAAGGTCGG AAAGCGTATC 
CTTTCGGGGA TGGGCTTCCT GGTTTCCGAG GCGCCGAGCA GCCTTGAAGC GCTCGTGCGA
TGCGAAGCCG AACTTCCCAA CATTCTGATC GTCGATGCGG GCCTTGATGG CGCGCTCGAC
CTGATCGGCA ATATCCGTCG CCTGCCTGAA GGCGCGTCGG TGCGAATTTA CTATTGTGTC
GTTCAGGCCG ATCTCAGGAA GATGATGGCC GGTAAGCGGG CCGGTGCCGA CGACTTCCTG
CTGAAACCAT TCGACCGCAA GATCCTGACG AGCGTTTTCG CCGGTCAGTC CATGGCGGCC
TGA
 
Protein sequence
MRRLMIADGS DVVRKVGKRI LSGMGFLVSE APSSLEALVR CEAELPNILI VDAGLDGALD 
LIGNIRRLPE GASVRIYYCV VQADLRKMMA GKRAGADDFL LKPFDRKILT SVFAGQSMAA