Gene Smed_2577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2577 
Symbol 
ID5323445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2674077 
End bp2674574 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content61% 
IMG OID640791520 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001328242 
Protein GI150397775 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.271919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACCGGC ATTTTGTTTG TAATAACCGT CATTTTGCCG GCGCTTTCAA TTCCGGCCGA 
AGGAGACGGA AAATCGACGC TGTAGACAGA ACAATCCTCA GCATTTTGAG CCGCGAGGCG
CGCATTCCGA TGAAGTCGCT GGCCGGGCGC ATCGGTTTGT CACGCAGCGC GACGGCAGAG
CGCGTCGCAC GGCTGGAGAA GGCCGGTGTC ATCCGCGGCT ACCGCGCCGA TATCGGCCAG
CTGGAAGAAG GGCAGATCGA GGCCTTCCTC CTGGTGACGC TGCAGCGGAC GCCTTCGCTT
GGCGTGCTTG ACCGGCTCGC CGGGTTTTCC TCGGTCAGGC GGGTCTCCTC CGTCAGCGGT
CAGCTCGACC TTATCGTGGA GGTGGAGGTC GCATCGATCA ATGCGCTCAA CGAGTTGCGC
AACGAGGTTG CGCAACTCGA CAATGTCGAG GATCTGACCA CCTCGATCGT GCTGCGCCGC
GACATCGAGC GAGGCTGA
 
Protein sequence
MHRHFVCNNR HFAGAFNSGR RRRKIDAVDR TILSILSREA RIPMKSLAGR IGLSRSATAE 
RVARLEKAGV IRGYRADIGQ LEEGQIEAFL LVTLQRTPSL GVLDRLAGFS SVRRVSSVSG
QLDLIVEVEV ASINALNELR NEVAQLDNVE DLTTSIVLRR DIERG