Gene Smed_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2555 
Symbol 
ID5323423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2652630 
End bp2653406 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content60% 
IMG OID640791498 
Productputative signal peptide protein 
Protein accessionYP_001328220 
Protein GI150397753 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.709242 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTGT GCATTGGATT TCGCGCGCCG GCACTCCTGG CCGCCATGAT GTTTTCCACA 
GCTCCGCTCG CTGCGGAGGT GTCGCATCAG ACGGATTACA GTATCAGGCT TGCCGGCCTG
CCTCTGGCGC GCGCATCGTT CCACACCGAG GTCGAAAAGA ATCGCTACAC GATCTCCGGA
ACGCTGAATT CCTCAGGGCT CGCGGATATC ATCAGCCACA CGACCGGGCA GACTCGCGTC
TCGGGGGTGA TCGACCGAGA TCATCTACGG GCCAGCGAAT ATTCCATGTC CTATCGTAGT
GGGCGGAAGG GCCGGGCCAT CAATGTGAGT TTTCGCAACG GCAATGTCGT GCGATCAAGC
ATGGTCCCGA AGCGTAGCCC TTTGCCAAAG AACTGGGTGC CGGTCACCAG CCGGGATATG
CGAAACGTGC TGGATCCGCT CTCGGGCCTG ATCATCCCGG CCAAGGCCCG GGTCTGCCCC
AACACCCTGC CGATCTTCGA TGGCGAATCG CGACTCGACA TAAGGCTTTC GCCGAAGGGG
ACTAGAAACT TCAAAACGAG GGGATTCGAG GGGGAGGTCA TCGTCTGCGG CATCCGCTTC
GTGCCGAAGG CCGGATATCG TAAAGGACGC GAGGACGTCG AATATCTGCG CCGCCTGGGA
ACCATGGAGA TCTGGTATGC GAAAGCGAAC GGCGTAGACG TCTATGCGCC GGTCTATGCG
CGCATACCGA CGAAGATTGG CCCTGTCACG GTGTCGGCGA CGCGATTCGG CGATTGA
 
Protein sequence
MKLCIGFRAP ALLAAMMFST APLAAEVSHQ TDYSIRLAGL PLARASFHTE VEKNRYTISG 
TLNSSGLADI ISHTTGQTRV SGVIDRDHLR ASEYSMSYRS GRKGRAINVS FRNGNVVRSS
MVPKRSPLPK NWVPVTSRDM RNVLDPLSGL IIPAKARVCP NTLPIFDGES RLDIRLSPKG
TRNFKTRGFE GEVIVCGIRF VPKAGYRKGR EDVEYLRRLG TMEIWYAKAN GVDVYAPVYA
RIPTKIGPVT VSATRFGD