Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2555 |
Symbol | |
ID | 5323423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2652630 |
End bp | 2653406 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640791498 |
Product | putative signal peptide protein |
Protein accession | YP_001328220 |
Protein GI | 150397753 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.709242 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGTTGT GCATTGGATT TCGCGCGCCG GCACTCCTGG CCGCCATGAT GTTTTCCACA GCTCCGCTCG CTGCGGAGGT GTCGCATCAG ACGGATTACA GTATCAGGCT TGCCGGCCTG CCTCTGGCGC GCGCATCGTT CCACACCGAG GTCGAAAAGA ATCGCTACAC GATCTCCGGA ACGCTGAATT CCTCAGGGCT CGCGGATATC ATCAGCCACA CGACCGGGCA GACTCGCGTC TCGGGGGTGA TCGACCGAGA TCATCTACGG GCCAGCGAAT ATTCCATGTC CTATCGTAGT GGGCGGAAGG GCCGGGCCAT CAATGTGAGT TTTCGCAACG GCAATGTCGT GCGATCAAGC ATGGTCCCGA AGCGTAGCCC TTTGCCAAAG AACTGGGTGC CGGTCACCAG CCGGGATATG CGAAACGTGC TGGATCCGCT CTCGGGCCTG ATCATCCCGG CCAAGGCCCG GGTCTGCCCC AACACCCTGC CGATCTTCGA TGGCGAATCG CGACTCGACA TAAGGCTTTC GCCGAAGGGG ACTAGAAACT TCAAAACGAG GGGATTCGAG GGGGAGGTCA TCGTCTGCGG CATCCGCTTC GTGCCGAAGG CCGGATATCG TAAAGGACGC GAGGACGTCG AATATCTGCG CCGCCTGGGA ACCATGGAGA TCTGGTATGC GAAAGCGAAC GGCGTAGACG TCTATGCGCC GGTCTATGCG CGCATACCGA CGAAGATTGG CCCTGTCACG GTGTCGGCGA CGCGATTCGG CGATTGA
|
Protein sequence | MKLCIGFRAP ALLAAMMFST APLAAEVSHQ TDYSIRLAGL PLARASFHTE VEKNRYTISG TLNSSGLADI ISHTTGQTRV SGVIDRDHLR ASEYSMSYRS GRKGRAINVS FRNGNVVRSS MVPKRSPLPK NWVPVTSRDM RNVLDPLSGL IIPAKARVCP NTLPIFDGES RLDIRLSPKG TRNFKTRGFE GEVIVCGIRF VPKAGYRKGR EDVEYLRRLG TMEIWYAKAN GVDVYAPVYA RIPTKIGPVT VSATRFGD
|
| |