Gene Smed_2553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2553 
Symbol 
ID5323421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2651075 
End bp2651539 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID640791496 
Producthypothetical protein 
Protein accessionYP_001328218 
Protein GI150397751 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCC GGGAGATGAC GGCGGCAGCC ATTATCGAAA CCCTGAGGCT CGCGCGGCAT 
CCTGAGGGTG GCTGGTATGG CGAGACATTC CGCGACGCCG ACGGCGGTCC GCGCGGTCAC
TCAACGGCCA TATACTACCT GCTCGAGCGG GGCGACCGAT CGCACTGGCA CCGCGTTCGC
GATGCCGCAG AGGTCTGGCA CTACTACGCC GGCGCGCCGC TCGAACTTAG CATTGGCGAA
CCAGGCAGGC CCCCTTCTCA GGTCCGGCTG GGCTCAGACA TTCCCGCCGG AGAACGGCCG
CAGCATGTCG TCCCCGCCAA CTGGTGGCAA TCCGCCGCTT CGCTCGGAGA CTGGACGCTC
GTCGGCTGCA CCGTTGCCCC CGGGTTTGAT TTTACCGTCT TCGAGATGGC GCCCCCGGAA
TGGCAGCCGC CTGACGCACA CAAAGGGGCT CAAGTGAACG GGTGA
 
Protein sequence
MTTREMTAAA IIETLRLARH PEGGWYGETF RDADGGPRGH STAIYYLLER GDRSHWHRVR 
DAAEVWHYYA GAPLELSIGE PGRPPSQVRL GSDIPAGERP QHVVPANWWQ SAASLGDWTL
VGCTVAPGFD FTVFEMAPPE WQPPDAHKGA QVNG