Gene Smed_2523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2523 
Symbol 
ID5323391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2623349 
End bp2623873 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content64% 
IMG OID640791466 
Producthypothetical protein 
Protein accessionYP_001328188 
Protein GI150397721 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.580501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCATGG TTGAAGCTCC GCTCGTACAG CGCCGGCAAT TTCTTTTCGC CTTGCTCGTC 
ACCATCGGCA TGGCCGCGAC CGTCGGAATT GCGCTCGGCT TCGAGCATTT CGGCGGCTAC
ATCCCCTGCG CGCTCTGTCT ACTCCAGCGC GATCCTTACT ACTACGGCAT ACCGCTCGGC
GTTGCCGCCG TCCTCACAAG CGCCCTGAAG CTGCCCTCCT GGACCACCCG CACGCTGCTT
CTCATTATCG GCATCTTGAT GCTGATAGGC GCCGGTCTCG GTGTCTATCA CGCCGGCGCC
GAGTGGCATT TCTGGGAGGG CCCCTCGACC TGCGCCACCA CGGCCCAGGG CGTTTCCTCC
GATGTCGGCG ATCTGCTGGG CGATCTCGAC GCCAAGCATG CACCTTCCTG CACCGATGCT
GCCTTGCGCG TGTTTGGGCT TTCTTTTGCA GGCTGGAACG TTGTCGCGAG CCTGGTGCTT
GCGGCGATTG CGCTAAGCGG GGCGCGCCGG GGCCTGACAT CGTGA
 
Protein sequence
MCMVEAPLVQ RRQFLFALLV TIGMAATVGI ALGFEHFGGY IPCALCLLQR DPYYYGIPLG 
VAAVLTSALK LPSWTTRTLL LIIGILMLIG AGLGVYHAGA EWHFWEGPST CATTAQGVSS
DVGDLLGDLD AKHAPSCTDA ALRVFGLSFA GWNVVASLVL AAIALSGARR GLTS