Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2523 |
Symbol | |
ID | 5323391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2623349 |
End bp | 2623873 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640791466 |
Product | hypothetical protein |
Protein accession | YP_001328188 |
Protein GI | 150397721 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1495] Disulfide bond formation protein DsbB |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.580501 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTGCATGG TTGAAGCTCC GCTCGTACAG CGCCGGCAAT TTCTTTTCGC CTTGCTCGTC ACCATCGGCA TGGCCGCGAC CGTCGGAATT GCGCTCGGCT TCGAGCATTT CGGCGGCTAC ATCCCCTGCG CGCTCTGTCT ACTCCAGCGC GATCCTTACT ACTACGGCAT ACCGCTCGGC GTTGCCGCCG TCCTCACAAG CGCCCTGAAG CTGCCCTCCT GGACCACCCG CACGCTGCTT CTCATTATCG GCATCTTGAT GCTGATAGGC GCCGGTCTCG GTGTCTATCA CGCCGGCGCC GAGTGGCATT TCTGGGAGGG CCCCTCGACC TGCGCCACCA CGGCCCAGGG CGTTTCCTCC GATGTCGGCG ATCTGCTGGG CGATCTCGAC GCCAAGCATG CACCTTCCTG CACCGATGCT GCCTTGCGCG TGTTTGGGCT TTCTTTTGCA GGCTGGAACG TTGTCGCGAG CCTGGTGCTT GCGGCGATTG CGCTAAGCGG GGCGCGCCGG GGCCTGACAT CGTGA
|
Protein sequence | MCMVEAPLVQ RRQFLFALLV TIGMAATVGI ALGFEHFGGY IPCALCLLQR DPYYYGIPLG VAAVLTSALK LPSWTTRTLL LIIGILMLIG AGLGVYHAGA EWHFWEGPST CATTAQGVSS DVGDLLGDLD AKHAPSCTDA ALRVFGLSFA GWNVVASLVL AAIALSGARR GLTS
|
| |