Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2521 |
Symbol | |
ID | 5323388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2619430 |
End bp | 2620704 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640791463 |
Product | hypothetical protein |
Protein accession | YP_001328186 |
Protein GI | 150397719 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5653] Protein involved in cellulose biosynthesis (CelD) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCA ATGTCCATCT TCCCGCAGAC GCGAATGGCA GCGCGGACCG CCTGCTTGGC GGCCTTGCGC ATTCTGGTCT CGACGGGTTG CAGTCCGAGC GGACGCTGAT GATCGGAAGG CCCGGACGGC ATCTCGCGGT CTATCCCGCG AGGGCCGGAT ACGAGCTGCA ACGGGAGCTC GACTTCCTTT CCAATCGGGC CATCGAGCAG AACGTCTTCT TCACCGGCCG CTTTCTCGCG CCGGCCATGC CGCGCCTGGA AGATCGGGTG GTTCGGCTCG CGGTGATCCG CGACCAGAGC GAGCAGAGTA GCCGCATCCG GTTCCTTATG CCTTTCTCCA TAGAGAAGCC CGGCTTCGCG ATCGGCGCAT CCATCATCCG CGCCTGGTCC AATCCTTTCG GGCCGCTGGG AACGCCCCTT CTCGACGCCG AGGACGCAGC CGAAACGATC AGCAATCTCT ATGCCGCGCT GGCTACACCC TCAGCCGGCC TCCCGCCAGT GCTCGTGCTC CCCGACATCA GGTTGAACGG AAAATTCGCC CAGCTTGCGC GTGCCGTCGC GATCGGCGAA AACCTGCCGC TGACGGTGAC CGACACCTTC AGGCGGCCGA TGCTCGAAAG CCTGCTGGAC GGCCCTACCT ATCTGAGCGA GGCAATCGGC CCGCAGCGCC TCAGGGAGCT GAGGCGGCAG TGGAACAATC TCGCAAAGCA GGGATCGCTG ACTTACAGTG TTGCGCGTCG GCCCGATGAT ATCCGCCTGC GCATGGAGGA GTTTCTGGTC CTCGAAGCAT CCGGTTGGAA AGGCCGCGAA CGCAGTGCCA TGATCATGGA CCGCTTTCGC GCCGCCTTCG CAAGAGAGGC TATAACCAAC CTCGCAGAGG CGGATAGCGT CCGCATTCAC ACACTCGACC TGAACGGCAA GGCGATCGCG ACCATCATCG TCCTGATAAT GGCGGGCGAA GCCTATACCT GGAAGACGGC CTATGACGAG CGTTACGCCA AATATTCTCC CGGCAAGCTG CTCGTCGCCG AGTTGACGGA GTGGCATCTC GACGATGCCA ACATCATCCG CTCCGATTCC TGCGCGGTGC CCGATCATCC GGTGATGAGC CGCCTGTGGC AGGAGCGTGA GGAGATGGGC ACACTTGTGA TCGGGCTCGG GCAGAACCGC GACCGCGACG TGCGCCAGGT CGCAGCACAG CTTCACCTCT ATCGCAACAC CCGCAATATG GCTCGGCTGC TGCGCGAGAA GATCCGGGCG CTGGCAGGTC GCTGA
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Protein sequence | MIGNVHLPAD ANGSADRLLG GLAHSGLDGL QSERTLMIGR PGRHLAVYPA RAGYELQREL DFLSNRAIEQ NVFFTGRFLA PAMPRLEDRV VRLAVIRDQS EQSSRIRFLM PFSIEKPGFA IGASIIRAWS NPFGPLGTPL LDAEDAAETI SNLYAALATP SAGLPPVLVL PDIRLNGKFA QLARAVAIGE NLPLTVTDTF RRPMLESLLD GPTYLSEAIG PQRLRELRRQ WNNLAKQGSL TYSVARRPDD IRLRMEEFLV LEASGWKGRE RSAMIMDRFR AAFAREAITN LAEADSVRIH TLDLNGKAIA TIIVLIMAGE AYTWKTAYDE RYAKYSPGKL LVAELTEWHL DDANIIRSDS CAVPDHPVMS RLWQEREEMG TLVIGLGQNR DRDVRQVAAQ LHLYRNTRNM ARLLREKIRA LAGR
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